RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 ZNF337Q9Y3M9 751 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 FAM220BPB1ANY3 271 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 PGA4P0DJD7 388 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 PGA5P0DJD9 388 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 PAX1P15863 534 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 FUT3P21217 361 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 RPL3P39023 403 aaKnown RBP7.85□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF154Q13106 437 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 C1DQ13901 141 aaKnown RBP7.85□□□□□ -1.15
VPS13D-212ENST00000543766 ENDOGQ14249 297 aaKnown RBP7.85□□□□□ -1.15
VPS13D-212ENST00000543766 P2RY6Q15077 328 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 H2BFWTQ7Z2G1 175 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 C20orf144Q9BQM9 153 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 EIF5A2Q9GZV4 153 aaKnown RBP7.85□□□□□ -1.15
VPS13D-212ENST00000543766 SEC61A2Q9H9S3 476 aa7.85□□□□□ -1.15
VPS13D-212ENST00000543766 SHROOM3Q8TF72 1996 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 TMEM189A5PLL7 270 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 CDHR4A6H8M9 788 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF878C9JN71 531 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 H3BQ15 152 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 CD79AP11912 226 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 SDC2P34741 201 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 TUSC3Q13454 348 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 LCTLQ6UWM7 567 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 OR2T33Q8NG76 320 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 OR51G2Q8NGK0 314 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 OR5D16Q8NGK9 328 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 ZC2HC1AQ96GY0 325 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 MGLLQ99685 303 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 SLC25A37Q9NYZ2 338 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 OR5AC2Q9NZP5 309 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF835Q9Y2P0 537 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 B3GALT1Q9Y5Z6 326 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 RNASET2O00584 256 aaKnown RBP7.84□□□□□ -1.15
VPS13D-212ENST00000543766 SULT1A3P0DMM9 295 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 SULT1A4P0DMN0 295 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 HIST1H1TP22492 207 aaPredicted RBP7.84□□□□□ -1.15
VPS13D-212ENST00000543766 CDO1Q16878 200 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 UNQ6126/PRO20091Q6UXV3 157 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 RBPMS2Q6ZRY4 209 aaKnown RBP7.84□□□□□ -1.15
VPS13D-212ENST00000543766 SAXO1Q8IYX7 474 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 SYS1Q8N2H4 156 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 MS4A10Q96PG2 267 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 FEVQ99581 238 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 HRASLS2Q9NWW9 162 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 NDUFB11Q9NX14 153 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 POLR3KQ9Y2Y1 108 aaPredicted RBP7.84□□□□□ -1.15
VPS13D-212ENST00000543766 ARID1AO14497 2285 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 ADM5C9JUS6 153 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 REG1AP05451 166 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 OR4Q2P0C623 313 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 LINC00032P0C843 101 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 RPL35AP18077 110 aaKnown RBP7.84□□□□□ -1.15
VPS13D-212ENST00000543766 MAOAP21397 527 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 NSG1P42857 185 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 RPS15AP62244 130 aaKnown RBP7.84□□□□□ -1.15
VPS13D-212ENST00000543766 PSG4Q00888 419 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 ST3GAL2Q16842 350 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 OR10J3Q5JRS4 329 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 OR2T5Q6IEZ7 315 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 ZNF66Q6ZN08 573 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 APOBEC3FQ8IUX4 373 aaKnown RBP7.84□□□□□ -1.15
VPS13D-212ENST00000543766 GPR26Q8NDV2 337 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 OR2T29Q8NH02 315 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 PSMF1Q92530 271 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 CDKN2AIPNLQ96HQ2 116 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 ASB6Q9NWX5 421 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 MMP17Q9ULZ9 603 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 VDAC3Q9Y277 283 aa7.84□□□□□ -1.15
VPS13D-212ENST00000543766 PLXNA1Q9UIW2 1896 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 TINCRA0A1B0GVN0 87 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 A0A1W2PRE2 83 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 C7orf71A4D174 169 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 GFRA2O00451 464 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 XKRYO14609 159 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 OR1F1O43749 312 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 TOMM40O96008 361 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 CD37P11049 281 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 PIPP12273 146 aaPredicted RBP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 AK4P27144 223 aaPredicted RBP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 SNCAP37840 140 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 TIAL1Q01085 375 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 NKPD1Q17RQ9 610 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 TCEANCQ8N8B7 351 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 RSPRY1Q96DX4 576 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 DNAJA3Q96EY1 480 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 OR7D2Q96RA2 312 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 OR51I1Q9H343 314 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 RPS6KB2Q9UBS0 482 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 CEP290O15078 2479 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 EIF4E2O60573 245 aaKnown RBP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 TBX6O95947 436 aaPredicted RBP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 ISG15P05161 165 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 SMIM10L1P0DMW3 83 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 ATP1B2P14415 290 aaPredicted RBP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 PYCR1P32322 319 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 OPRD1P41143 372 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 WNT3P56703 355 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 BACE1P56817 501 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms