RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 OR14K1Q8NGZ2 314 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 OR2T27Q8NH04 317 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 RFKQ969G6 155 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 FOXRED1Q96CU9 486 aaPredicted RBP10.7□□□□□ -0.7
RTN3-213ENST00000543552 ZNF488Q96MN9 340 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 IL4I1Q96RQ9 567 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 ADI1Q9BV57 179 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 MEGF9Q9H1U4 602 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 RANBP3Q9H6Z4 567 aaPredicted RBP10.7□□□□□ -0.7
RTN3-213ENST00000543552 OR14J1Q9UGF5 321 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 MRM2Q9UI43 246 aaKnown RBP10.7□□□□□ -0.7
RTN3-213ENST00000543552 AP4S1Q9Y587 144 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 TGP01266 2768 aa10.7□□□□□ -0.7
RTN3-213ENST00000543552 A0A1B0GTI1 187 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 M0R129 80 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 SYT7O43581 403 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 ATP5HO75947 161 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 SERPINA3P01011 423 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 RBP4P02753 201 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 TK1P04183 234 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 HTR1FP30939 366 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 ATP6V1E1P36543 226 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 KRTAP10-3P60369 221 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 EFNB1P98172 346 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 TMED1Q13445 227 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 TMEM200BQ69YZ2 307 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 SLC35E4Q6ICL7 350 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 HCP5Q6MZN7 132 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 Q6ZSR3 168 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 FAM220AQ7Z4H9 259 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 BCDIN3DQ7Z5W3 292 aaKnown RBP10.69□□□□□ -0.7
RTN3-213ENST00000543552 MKXQ8IYA7 352 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 ASCC1Q8N9N2 400 aaKnown RBP10.69□□□□□ -0.7
RTN3-213ENST00000543552 OR2T6Q8NHC8 308 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 PPP1R14AQ96A00 147 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 OSBPL10Q9BXB5 764 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 CADM1Q9BY67 442 aaKnown RBP10.69□□□□□ -0.7
RTN3-213ENST00000543552 NPFFR1Q9GZQ6 430 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 HES4Q9HCC6 221 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 SLC22A13Q9Y226 551 aa10.69□□□□□ -0.7
RTN3-213ENST00000543552 FAM230AA0A1W2PPH8 454 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 METTL15A6NJ78 407 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 MITFO75030 526 aaPredicted RBP10.68□□□□□ -0.7
RTN3-213ENST00000543552 SULT1C4O75897 302 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 RPP14O95059 124 aaKnown RBP10.68□□□□□ -0.7
RTN3-213ENST00000543552 CSF1P09603 554 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 UBCP0CG48 685 aaKnown RBP10.68□□□□□ -0.7
RTN3-213ENST00000543552 KIR2DS4P43632 304 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 FUT6P51993 359 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 CNN3Q15417 329 aaKnown RBP10.68□□□□□ -0.7
RTN3-213ENST00000543552 C1orf146Q5VVC0 180 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 PLEKHG7Q6ZR37 379 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 GDPD3Q7L5L3 318 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 CATSPERDQ86XM0 798 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 Q8IYB0 196 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 OR10H4Q8NGA5 316 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 OR8J1Q8NGP2 316 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 OR13D1Q8NGV5 346 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 PP6455Q8WZ26 134 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 C10orf35Q96D05 121 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 CEP19Q96LK0 163 aa10.68□□□□□ -0.7
RTN3-213ENST00000543552 A0A1W2PQL4 384 aaPredicted RBP10.67□□□□□ -0.7
RTN3-213ENST00000543552 K7N7A8 449 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 MAGEB4O15481 346 aaPredicted RBP10.67□□□□□ -0.7
RTN3-213ENST00000543552 CYB5AP00167 134 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 CHRM2P08172 466 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 COX7A1P24310 79 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 EPHA2P29317 976 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 CEBPDP49716 269 aaPredicted RBP10.67□□□□□ -0.7
RTN3-213ENST00000543552 CDC42P60953 191 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 ERVK11-1P61568 191 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 BNIP1Q12981 228 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 HERPUD1Q15011 391 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 LY6EQ16553 131 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 ANGPTL5Q86XS5 388 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 ENTHD1Q8IYW4 607 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 OR4M1Q8NGD0 313 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 TRMT10AQ8TBZ6 339 aaKnown RBP10.67□□□□□ -0.7
RTN3-213ENST00000543552 BORCS8Q96FH0 119 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 TBX5Q99593 518 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 CIB1Q99828 191 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 CDCA4Q9BXL8 241 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 GABARAPL3Q9BY60 117 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 CHST5Q9GZS9 411 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 ABCB10Q9NRK6 738 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 PITPNC1Q9UKF7 332 aa10.67□□□□□ -0.7
RTN3-213ENST00000543552 TBL2Q9Y4P3 447 aaKnown RBP10.67□□□□□ -0.7
RTN3-213ENST00000543552 A6NIN4 97 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 VGLL3A8MV65 326 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 H3BUI4 141 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 CIB2O75838 187 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 TSPAN15O95858 294 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 ZNF728P0DKX0 622 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 PIPP12273 146 aaPredicted RBP10.66□□□□□ -0.7
RTN3-213ENST00000543552 CCL3L1P16619 93 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 BMXP51813 675 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 EFNB2P52799 333 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 EDDM3BP56851 147 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 COL10A1Q03692 680 aa10.66□□□□□ -0.7
RTN3-213ENST00000543552 MEF2CQ06413 473 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms