RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 RAB35Q15286 201 aa2.56□□□□□ -2
USP28-210ENST00000542033 RSU1Q15404 277 aa2.56□□□□□ -2
USP28-210ENST00000542033 SIX1Q15475 284 aaPredicted RBP2.56□□□□□ -2
USP28-210ENST00000542033 PCK2Q16822 640 aa2.56□□□□□ -2
USP28-210ENST00000542033 QRICH1Q2TAL8 776 aa2.56□□□□□ -2
USP28-210ENST00000542033 SCGB2B2Q4G0G5 96 aa2.56□□□□□ -2
USP28-210ENST00000542033 ZNF658BQ4V348 819 aaPredicted RBP2.56□□□□□ -2
USP28-210ENST00000542033 SPIN3Q5JUX0 258 aa2.56□□□□□ -2
USP28-210ENST00000542033 COL5A1-AS1Q5SY13 56 aa2.56□□□□□ -2
USP28-210ENST00000542033 LINC00242Q5T6M2 205 aa2.56□□□□□ -2
USP28-210ENST00000542033 RAET1LQ5VY80 246 aa2.56□□□□□ -2
USP28-210ENST00000542033 NXNL2Q5VZ03 156 aa2.56□□□□□ -2
USP28-210ENST00000542033 XAF1Q6GPH4 301 aa2.56□□□□□ -2
USP28-210ENST00000542033 GLYATQ6IB77 296 aa2.56□□□□□ -2
USP28-210ENST00000542033 SPINK14Q6IE38 97 aa2.56□□□□□ -2
USP28-210ENST00000542033 FAM71F2Q6NXP2 309 aa2.56□□□□□ -2
USP28-210ENST00000542033 CASP12Q6UXS9 341 aa2.56□□□□□ -2
USP28-210ENST00000542033 ACOT7LQ6ZUV0 252 aa2.56□□□□□ -2
USP28-210ENST00000542033 TMEM179Q6ZVK1 233 aa2.56□□□□□ -2
USP28-210ENST00000542033 TMUB2Q71RG4 321 aa2.56□□□□□ -2
USP28-210ENST00000542033 HSD11B1LQ7Z5J1 315 aa2.56□□□□□ -2
USP28-210ENST00000542033 SLC39A11Q8N1S5 342 aa2.56□□□□□ -2
USP28-210ENST00000542033 Q8N402 240 aa2.56□□□□□ -2
USP28-210ENST00000542033 ZSCAN4Q8NAM6 433 aaPredicted RBP2.56□□□□□ -2
USP28-210ENST00000542033 UBAC2Q8NBM4 344 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR4E2Q8NGC2 313 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR5D13Q8NGL4 314 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR4A15Q8NGL6 344 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR6K3Q8NGY3 331 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR2G2Q8NGZ5 317 aa2.56□□□□□ -2
USP28-210ENST00000542033 NUBPLQ8TB37 319 aa2.56□□□□□ -2
USP28-210ENST00000542033 RNASEH2CQ8TDP1 164 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 RXFP4Q8TDU9 374 aa2.56□□□□□ -2
USP28-210ENST00000542033 GPR151Q8TDV0 419 aa2.56□□□□□ -2
USP28-210ENST00000542033 TBCKQ8TEA7 893 aa2.56□□□□□ -2
USP28-210ENST00000542033 SSC4DQ8WTU2 575 aa2.56□□□□□ -2
USP28-210ENST00000542033 DNAJB3Q8WWF6 145 aa2.56□□□□□ -2
USP28-210ENST00000542033 PIGCQ92535 297 aa2.56□□□□□ -2
USP28-210ENST00000542033 RORBQ92753 470 aa2.56□□□□□ -2
USP28-210ENST00000542033 NABP1Q96AH0 204 aa2.56□□□□□ -2
USP28-210ENST00000542033 ROPN1LQ96C74 230 aa2.56□□□□□ -2
USP28-210ENST00000542033 MRPS24Q96EL2 167 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 SMARCD1Q96GM5 515 aa2.56□□□□□ -2
USP28-210ENST00000542033 AMDHD1Q96NU7 426 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR5B12Q96R08 314 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR8B4Q96RC9 309 aa2.56□□□□□ -2
USP28-210ENST00000542033 NPY6RQ99463 290 aa2.56□□□□□ -2
USP28-210ENST00000542033 S100A13Q99584 98 aa2.56□□□□□ -2
USP28-210ENST00000542033 GINS4Q9BRT9 223 aa2.56□□□□□ -2
USP28-210ENST00000542033 LXNQ9BS40 222 aa2.56□□□□□ -2
USP28-210ENST00000542033 MARVELD1Q9BSK0 173 aa2.56□□□□□ -2
USP28-210ENST00000542033 SNHG12Q9BXW3 62 aa2.56□□□□□ -2
USP28-210ENST00000542033 RAB34Q9BZG1 259 aa2.56□□□□□ -2
USP28-210ENST00000542033 ACTR3CQ9C0K3 210 aaPredicted RBP2.56□□□□□ -2
USP28-210ENST00000542033 NAA50Q9GZZ1 169 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 OR2AG1Q9H205 316 aa2.56□□□□□ -2
USP28-210ENST00000542033 CDC42EP4Q9H3Q1 356 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 WDR55Q9H6Y2 383 aaPredicted RBP2.56□□□□□ -2
USP28-210ENST00000542033 WFDC1Q9HC57 220 aa2.56□□□□□ -2
USP28-210ENST00000542033 ZNF160Q9HCG1 818 aa2.56□□□□□ -2
USP28-210ENST00000542033 C6orf50Q9HD87 102 aa2.56□□□□□ -2
USP28-210ENST00000542033 ESM1Q9NQ30 184 aa2.56□□□□□ -2
USP28-210ENST00000542033 LHX9Q9NQ69 397 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR2S2Q9NQN1 319 aa2.56□□□□□ -2
USP28-210ENST00000542033 SMCO4Q9NRQ5 59 aa2.56□□□□□ -2
USP28-210ENST00000542033 FBXL3Q9UKT7 428 aa2.56□□□□□ -2
USP28-210ENST00000542033 RARRES3Q9UL19 164 aa2.56□□□□□ -2
USP28-210ENST00000542033 RASD1Q9Y272 281 aa2.56□□□□□ -2
USP28-210ENST00000542033 PIGLQ9Y2B2 252 aa2.56□□□□□ -2
USP28-210ENST00000542033 SLC35A3Q9Y2D2 325 aa2.56□□□□□ -2
USP28-210ENST00000542033 STYXL1Q9Y6J8 313 aa2.56□□□□□ -2
USP28-210ENST00000542033 ROBO3Q96MS0 1386 aa2.56□□□□□ -2
USP28-210ENST00000542033 ATRNO75882 1429 aa2.56□□□□□ -2
USP28-210ENST00000542033 EDC4Q6P2E9 1401 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 C1orf167Q5SNV9 1468 aa2.56□□□□□ -2
USP28-210ENST00000542033 ARHGAP5Q13017 1502 aa2.56□□□□□ -2
USP28-210ENST00000542033 DEPDC5O75140 1603 aa2.56□□□□□ -2
USP28-210ENST00000542033 C4AP0C0L4 1744 aa2.56□□□□□ -2
USP28-210ENST00000542033 C4BP0C0L5 1744 aa2.56□□□□□ -2
USP28-210ENST00000542033 LAMB4A4D0S4 1761 aa2.56□□□□□ -2
USP28-210ENST00000542033 CCDC88AQ3V6T2 1871 aa2.56□□□□□ -2
USP28-210ENST00000542033 CDK5RAP2Q96SN8 1893 aa2.56□□□□□ -2
USP28-210ENST00000542033 TRAV30A0A087WSZ9 112 aa2.55□□□□□ -2
USP28-210ENST00000542033 A0A096LPI6 279 aa2.55□□□□□ -2
USP28-210ENST00000542033 TRAV39A0A0B4J263 110 aa2.55□□□□□ -2
USP28-210ENST00000542033 A0A1B0GTH9 108 aa2.55□□□□□ -2
USP28-210ENST00000542033 TMEM269A0A1B0GVZ9 245 aa2.55□□□□□ -2
USP28-210ENST00000542033 COLCA2A8K830 154 aa2.55□□□□□ -2
USP28-210ENST00000542033 B4DXG7 233 aa2.55□□□□□ -2
USP28-210ENST00000542033 TRIM49D1C9J1S8 452 aa2.55□□□□□ -2
USP28-210ENST00000542033 F6UZH7 168 aa2.55□□□□□ -2
USP28-210ENST00000542033 G3V3Y1 287 aa2.55□□□□□ -2
USP28-210ENST00000542033 SMLR1H3BR10 107 aa2.55□□□□□ -2
USP28-210ENST00000542033 K7EQG2 157 aa2.55□□□□□ -2
USP28-210ENST00000542033 OR7A17O14581 309 aa2.55□□□□□ -2
USP28-210ENST00000542033 TET3O43151 1660 aa2.55□□□□□ -2
USP28-210ENST00000542033 TYROBPO43914 113 aa2.55□□□□□ -2
USP28-210ENST00000542033 RDH16O75452 317 aa2.55□□□□□ -2
USP28-210ENST00000542033 TSPAN13O95857 204 aa2.55□□□□□ -2
USP28-210ENST00000542033 GCGP01275 180 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms