RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ATP6V1E1P36543 226 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 CDC42P60953 191 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 RPL31P62899 125 aaKnown RBP18.13■□□□□ 0.49
SCARB1-206ENST00000539320 Q6ZSV7 163 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 FAM220AQ7Z4H9 259 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 CALHM1Q8IU99 346 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 ZSCAN4Q8NAM6 433 aaPredicted RBP18.13■□□□□ 0.49
SCARB1-206ENST00000539320 RORBQ92753 470 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 RFKQ969G6 155 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 EME1Q96AY2 570 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 OR14J1Q9UGF5 321 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 SLC7A11Q9UPY5 501 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 CMYA5Q8N3K9 4069 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 H3BSH0 61 aa18.12■□□□□ 0.49
SCARB1-206ENST00000539320 GATBO75879 557 aaKnown RBP18.12■□□□□ 0.49
SCARB1-206ENST00000539320 PROK1P58294 105 aa18.12■□□□□ 0.49
SCARB1-206ENST00000539320 IL24Q13007 206 aa18.12■□□□□ 0.49
SCARB1-206ENST00000539320 MIDNQ504T8 468 aa18.12■□□□□ 0.49
SCARB1-206ENST00000539320 ANGPTL5Q86XS5 388 aa18.12■□□□□ 0.49
SCARB1-206ENST00000539320 BEND2Q8NDZ0 799 aa18.12■□□□□ 0.49
SCARB1-206ENST00000539320 CCDC54Q8NEL0 328 aa18.12■□□□□ 0.49
SCARB1-206ENST00000539320 MEGF8Q7Z7M0 2845 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 LOC107986453A0A1B0GWG9 222 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 FAM230AA0A1W2PPH8 454 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 CLPXO76031 633 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 ERVK11-1P61568 191 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 MKXQ8IYA7 352 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 PYDC1Q8WXC3 89 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 ADI1Q9BV57 179 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 CHST5Q9GZS9 411 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 C16orf95Q9H693 158 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 IMPAD1Q9NX62 359 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 USE1Q9NZ43 259 aa18.11■□□□□ 0.49
SCARB1-206ENST00000539320 TIMM23O14925 209 aa18.1■□□□□ 0.49
SCARB1-206ENST00000539320 UBCP0CG48 685 aaKnown RBP18.1■□□□□ 0.49
SCARB1-206ENST00000539320 KRTAP10-3P60369 221 aa18.1■□□□□ 0.49
SCARB1-206ENST00000539320 ISL1P61371 349 aa18.1■□□□□ 0.49
SCARB1-206ENST00000539320 ZNF85Q03923 595 aa18.1■□□□□ 0.49
SCARB1-206ENST00000539320 OR4M1Q8NGD0 313 aa18.1■□□□□ 0.49
SCARB1-206ENST00000539320 C17orf50Q8WW18 174 aa18.1■□□□□ 0.49
SCARB1-206ENST00000539320 FAM234AQ9H0X4 552 aa18.1■□□□□ 0.49
SCARB1-206ENST00000539320 HEXA-AS1Q9H8Q6 139 aa18.1■□□□□ 0.49
SCARB1-206ENST00000539320 GNG8Q9UK08 70 aa18.1■□□□□ 0.49
SCARB1-206ENST00000539320 M0QZ24 198 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 TK1P04183 234 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 CCL3L1P16619 93 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 TGFBR2P37173 567 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 KIR3DL2P43630 455 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 ZNF273Q14593 569 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 UBE2V2Q15819 145 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 TP53I3Q53FA7 332 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 TMEM200BQ69YZ2 307 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 PRSS35Q8N3Z0 413 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 ASCC1Q8N9N2 400 aaKnown RBP18.09■□□□□ 0.49
SCARB1-206ENST00000539320 CEP19Q96LK0 163 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 ORC6Q9Y5N6 252 aa18.09■□□□□ 0.49
SCARB1-206ENST00000539320 IGKV1-27A0A075B6S5 117 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 hCG_1809904A0A1W2PP81 198 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 A0A1W2PPE2 198 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 A0A1W2PR64 198 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 A0A1W2PRV1 198 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 H3BUX3 64 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 TSPAN9O75954 239 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 ALPLP05186 524 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 PIPP12273 146 aaPredicted RBP18.08■□□□□ 0.48
SCARB1-206ENST00000539320 COX7A1P24310 79 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 FUT6P51993 359 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 ACTC1P68032 377 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 ACTA1P68133 377 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 CNN3Q15417 329 aaKnown RBP18.08■□□□□ 0.48
SCARB1-206ENST00000539320 LRRC75BQ2VPJ9 315 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 TRUB1Q8WWH5 349 aaKnown RBP18.08■□□□□ 0.48
SCARB1-206ENST00000539320 C10orf35Q96D05 121 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 BORCS8Q96FH0 119 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 SSX3Q99909 188 aa18.08■□□□□ 0.48
SCARB1-206ENST00000539320 K7N7A8 449 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 EI24O14681 340 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 KCNAB3O43448 404 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 SERPINA3P01011 423 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 ERVFRD-1P60508 538 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 COL10A1Q03692 680 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 OCLNQ16625 522 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 C11orf42Q8N5U0 333 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 PP6455Q8WZ26 134 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 SLAMF9Q96A28 289 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 AJUBAQ96IF1 538 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 PPA2Q9H2U2 334 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 TCF7L1Q9HCS4 588 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 MTCH1Q9NZJ7 389 aa18.07■□□□□ 0.48
SCARB1-206ENST00000539320 ENTPD6O75354 484 aa18.06■□□□□ 0.48
SCARB1-206ENST00000539320 BMXP51813 675 aa18.06■□□□□ 0.48
SCARB1-206ENST00000539320 AANATQ16613 207 aa18.06■□□□□ 0.48
SCARB1-206ENST00000539320 ZNF782Q6ZMW2 699 aaPredicted RBP18.06■□□□□ 0.48
SCARB1-206ENST00000539320 SLC25A26Q70HW3 274 aa18.06■□□□□ 0.48
SCARB1-206ENST00000539320 OR2G2Q8NGZ5 317 aa18.06■□□□□ 0.48
SCARB1-206ENST00000539320 RNFT2Q96EX2 444 aa18.06■□□□□ 0.48
SCARB1-206ENST00000539320 HRASLS5Q96KN8 279 aa18.06■□□□□ 0.48
SCARB1-206ENST00000539320 MEGF9Q9H1U4 602 aa18.06■□□□□ 0.48
SCARB1-206ENST00000539320 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.06■□□□□ 0.48
SCARB1-206ENST00000539320 F8VVB4 439 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms