RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 RPS11P62280 158 aaKnown RBP eCLIP11.32□□□□□ -0.6
CD9-208ENST00000538834 C6orf141Q5SZD1 244 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 BTN2A1Q7KYR7 527 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 SPSB1Q96BD6 273 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 TMIGD2Q96BF3 282 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 MED30Q96HR3 178 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 PGLYRP3Q96LB9 341 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 ZNF488Q96MN9 340 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 TBX15Q96SF7 602 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 DCTN5Q9BTE1 182 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 ANKRD60Q9BZ19 345 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 VCXQ9H320 206 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 NUP50Q9UKX7 468 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 SLC7A11Q9UPY5 501 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 POLDIP2Q9Y2S7 368 aa11.32□□□□□ -0.6
CD9-208ENST00000538834 TRBV2A0A0J9YWF9 115 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 TRBV5-5A0A0J9YX44 114 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 ZNF879B4DU55 563 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 GPX5O75715 221 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 SERPINA3P01011 423 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 TFF1P04155 84 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 PRKACBP22694 351 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 AZGP1P25311 298 aaKnown RBP11.31□□□□□ -0.6
CD9-208ENST00000538834 C21orf33P30042 268 aaPredicted RBP11.31□□□□□ -0.6
CD9-208ENST00000538834 RBP2P50120 134 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 IL13RA1P78552 427 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 ACSM1Q08AH1 577 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 IRF3Q14653 427 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 CNN3Q15417 329 aaKnown RBP11.31□□□□□ -0.6
CD9-208ENST00000538834 BTNL3Q6UXE8 466 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 TMPRSS11AQ6ZMR5 421 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 C1orf122Q6ZSJ8 110 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 NANOGP1Q8N7R0 232 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 SMIM19Q96E16 107 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 MRI1Q9BV20 369 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 DUSP21Q9H596 190 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 UNKLQ9H9P5 680 aaKnown RBP11.31□□□□□ -0.6
CD9-208ENST00000538834 PLEKHA1Q9HB21 404 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 SNTG1Q9NSN8 517 aa11.31□□□□□ -0.6
CD9-208ENST00000538834 PAK1IP1Q9NWT1 392 aaPredicted RBP11.31□□□□□ -0.6
CD9-208ENST00000538834 IGKV1-12A0A0C4DH73 117 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 FAM230AA0A1W2PPH8 454 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 RFPL4AA6NLU0 287 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 RFPL4AL1F8VTS6 287 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 SLC1A7O00341 560 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 ZNF737O75373 536 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 VENTXO95231 258 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 KNG1P01042 644 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 IGKV1D-12P01611 117 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 HILS1P60008 231 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 ZP1P60852 638 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 FGF12P61328 243 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 SLC35A2P78381 396 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 SMIM21Q3B7S5 101 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 KRTAP24-1Q3LI83 254 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 METAP1DQ6UB28 335 aaPredicted RBP11.3□□□□□ -0.6
CD9-208ENST00000538834 LHFPL2Q6ZUX7 228 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 SERPINA12Q8IW75 414 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 KIR3DL3Q8N743 410 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 Q8N7P7 452 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 ZNF676Q8N7Q3 588 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 PNLDC1Q8NA58 520 aaKnown RBP11.3□□□□□ -0.6
CD9-208ENST00000538834 Q8NFD4 153 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 TRMT10AQ8TBZ6 339 aaKnown RBP11.3□□□□□ -0.6
CD9-208ENST00000538834 BORCS8Q96FH0 119 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 WDFY2Q96P53 400 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 OPALINQ96PE5 141 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 CDCA4Q9BXL8 241 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 ZCCHC4Q9H5U6 513 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 CNTD2Q9H8S5 307 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 DNAJB11Q9UBS4 358 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 ZNF69Q9UC07 566 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 LSM2Q9Y333 95 aaKnown RBP11.3□□□□□ -0.6
CD9-208ENST00000538834 KPTNQ9Y664 436 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 TENM1Q9UKZ4 2725 aa11.3□□□□□ -0.6
CD9-208ENST00000538834 ANK2Q01484 3957 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 NDUFB3O43676 98 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 ATP6V1G2O95670 118 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 ALDOBP05062 364 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 CDK1P06493 297 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 IGFBP3P17936 291 aaPredicted RBP11.29□□□□□ -0.6
CD9-208ENST00000538834 PRDX2P32119 198 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 ATP1B3P54709 279 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 BPIFB3P59826 476 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 PDZK1IP1Q13113 114 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 SCGB2A2Q13296 93 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 ZNF146Q15072 292 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 LRRC10Q5BKY1 277 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 ASCL4Q6XD76 172 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 SAXO1Q8IYX7 474 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 ZNF561Q8N587 486 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 C11orf42Q8N5U0 333 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 ZNRF1Q8ND25 227 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 BPIFB6Q8NFQ5 453 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 OR13C3Q8NGS6 347 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 NPRL2Q8WTW4 380 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 ZFAND2BQ8WV99 257 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 GATAD2BQ8WXI9 593 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 TNFRSF14Q92956 283 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms