RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 S100A16Q96FQ6 103 aaKnown RBP6.18□□□□□ -1.42
MSH6-209ENST00000538136 POM121L2Q96KW2 1035 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 JAM3Q9BX67 310 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 MRPL13Q9BYD1 178 aaKnown RBP6.18□□□□□ -1.42
MSH6-209ENST00000538136 C17orf100A8MU93 164 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 GEMIN2O14893 280 aaKnown RBP6.18□□□□□ -1.42
MSH6-209ENST00000538136 THBDP07204 575 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 UCHL1P09936 223 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 PRKACBP22694 351 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 MMP15P51511 669 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 HERV-K104P61576 105 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 ZP4Q12836 540 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 IL18R1Q13478 541 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 ABCA11PQ4W5N1 156 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 SLC25A53Q5H9E4 307 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 MZT2AQ6P582 158 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 Q6ZTK2 550 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 PHC2Q8IXK0 858 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 APH1BQ8WW43 257 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 LHX4Q969G2 390 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 DMRTA2Q96SC8 542 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 HDHD3Q9BSH5 251 aaPredicted RBP6.18□□□□□ -1.42
MSH6-209ENST00000538136 SLC25A19Q9HC21 320 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 HIF1ANQ9NWT6 349 aa6.18□□□□□ -1.42
MSH6-209ENST00000538136 HPGDSO60760 199 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 OR8U9P0C7N5 309 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 MGMTP16455 207 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 NFYAP23511 347 aaPredicted RBP6.17□□□□□ -1.42
MSH6-209ENST00000538136 CDK2P24941 298 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 GNRHRP30968 328 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 PDLIM4P50479 330 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 SLC25A1P53007 311 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 RPS16P62249 146 aaKnown RBP6.17□□□□□ -1.42
MSH6-209ENST00000538136 SMIM21Q3B7S5 101 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 RNF144BQ7Z419 303 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 FAM58AQ8N1B3 248 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 OR8U1Q8NH10 309 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 C12orf43Q96C57 262 aaKnown RBP6.17□□□□□ -1.42
MSH6-209ENST00000538136 DHRS9Q9BPW9 319 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 ZNF426Q9BUY5 554 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 C8orf4Q9NR00 106 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 RSL24D1Q9UHA3 163 aaKnown RBP6.17□□□□□ -1.42
MSH6-209ENST00000538136 DIMT1Q9UNQ2 313 aaKnown RBP6.17□□□□□ -1.42
MSH6-209ENST00000538136 POLDIP2Q9Y2S7 368 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 SCGB1D2O95969 90 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 CCL3L1P16619 93 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 RORCP51449 518 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 RAB12Q6IQ22 244 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 BTNL3Q6UXE8 466 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 CALHM1Q8IU99 346 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 CCDC36Q8IYA8 594 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 LYG1Q8N1E2 194 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 OR8B3Q8NGG8 313 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 OR52N1Q8NH53 320 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 SLC35B4Q969S0 331 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 MRPL24Q96A35 216 aaKnown RBP6.17□□□□□ -1.42
MSH6-209ENST00000538136 FAM3DQ96BQ1 224 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 OR8B2Q96RD0 313 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 CBLN4Q9NTU7 201 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 TMEM106BQ9NUM4 274 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 B3GNT2Q9NY97 397 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 LINC00527Q9UJ94 153 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 ZFHX3Q15911 3703 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 COL4A2P08572 1712 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 SH2D1BO14796 132 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 RFX2P48378 723 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 PPP5CP53041 499 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 SNRPGP62308 76 aaKnown RBP6.17□□□□□ -1.42
MSH6-209ENST00000538136 FAM3AP98173 230 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 KCTD21Q4G0X4 260 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 KCTD9Q7L273 389 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 ADPRHL1Q8NDY3 354 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 RAB3CQ96E17 227 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 GABARAPL3Q9BY60 117 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 GSKIPQ9P0R6 139 aa6.17□□□□□ -1.42
MSH6-209ENST00000538136 TRAV6A0A075B6T7 132 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 OR2AT4A6NND4 320 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 IGHA1P01876 353 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 OR3A1P47881 315 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 SLC35A2P78381 396 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 MZT1Q08AG7 82 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 TNK1Q13470 666 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 TRIM16LQ309B1 348 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 PHLDA2Q53GA4 152 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 SPRNQ5BIV9 151 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 GPR157Q5UAW9 335 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 HIST2H2BDQ6DRA6 164 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 LINC00114Q6XXX2 140 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 KCTD20Q7Z5Y7 419 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 POC5Q8NA72 575 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 OR8G5Q8NG78 346 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 OR10S1Q8NGN2 331 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 CPNE2Q96FN4 548 aaPredicted RBP6.16□□□□□ -1.42
MSH6-209ENST00000538136 COX4I2Q96KJ9 171 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 MRPS26Q9BYN8 205 aaKnown RBP6.16□□□□□ -1.42
MSH6-209ENST00000538136 CXXC4Q9H2H0 198 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 ZNF275Q9NSD4 429 aaPredicted RBP6.16□□□□□ -1.42
MSH6-209ENST00000538136 TBCCD1Q9NVR7 557 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 OR5V1Q9UGF6 321 aa6.16□□□□□ -1.42
MSH6-209ENST00000538136 ZNF835Q9Y2P0 537 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms