RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TSC22D1Q15714 1073 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 HIKESHIQ53FT3 197 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 HES3Q5TGS1 186 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 CALHM1Q8IU99 346 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 ZDHHC22Q8N966 263 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 OR2M7Q8NG81 312 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 OR5AP2Q8NGF4 316 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 SECTM1Q8WVN6 248 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 TMEM230Q96A57 120 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 ADAT1Q9BUB4 502 aaKnown RBP7.57□□□□□ -1.2
UBE3B-208ENST00000538070 BCL2L14Q9BZR8 327 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 B4GALT7Q9UBV7 327 aa7.57□□□□□ -1.2
UBE3B-208ENST00000538070 TNFSF12O43508 249 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 MT-CO3P00414 261 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 CRHP06850 196 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RPA2P15927 270 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 MPGP29372 298 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 CCL11P51671 97 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 PIGPP57054 158 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 TAS2R46P59540 309 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 SRSF6Q13247 344 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 CNN3Q15417 329 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF239Q16600 458 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 C10orf128Q5T292 105 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 PDSS1Q5T2R2 415 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RGS7BPQ6MZT1 257 aaPredicted RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 JMJD6Q6NYC1 403 aaPredicted RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 SGPP2Q8IWX5 399 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 OR5M9Q8NGP3 310 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 OR1S2Q8NGQ3 325 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 OR1S1Q8NH92 325 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 IL1F10Q8WWZ1 152 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RDH5Q92781 318 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RRNAD1Q96FB5 475 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 FOXD3Q9UJU5 478 aaPredicted RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 TNFSF18Q9UNG2 199 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 GPR132Q9UNW8 380 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 CEP295Q9C0D2 2601 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RNF222A6NCQ9 220 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF716A6NP11 495 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF705EA8MWA4 302 aaPredicted RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 M0R296 226 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 F12P00748 615 aaPredicted RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 MELTFP08582 738 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 UBBP0CG47 229 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RCC1P18754 421 aaPredicted RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 TAS2R31P59538 309 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 PPIAP62937 165 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 SNTB1Q13884 538 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 MPPED2Q15777 294 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 DCAF10Q5QP82 559 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF611Q8N823 705 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RNF138Q8WVD3 245 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 PSMF1Q92530 271 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 ZC3H10Q96K80 434 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RTBDNQ9BSG5 229 aaPredicted RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 ESRP2Q9H6T0 727 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 OTOGLQ3ZCN5 2332 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 IGKV1-12A0A0C4DH73 117 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 A0A1W2PNU3 283 aaPredicted RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 H0YIZ8 118 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 BCL2L11O43521 198 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 SYNGR3O43761 229 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 SFT2D2O95562 160 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 HPP00738 406 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 IGKV1D-12P01611 117 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 OMGP23515 440 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 MECP2P51608 486 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 HERV-K104P61576 105 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RAB1AP62820 205 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 MALLQ13021 153 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 C17orf78Q8N4C9 275 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 OR6K3Q8NGY3 331 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 KCNE4Q8WWG9 221 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 MRPL24Q96A35 216 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 HIST1H2AAQ96QV6 131 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 EDEM2Q9BV94 578 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 CRIM1Q9NZV1 1036 aa7.56□□□□□ -1.2
UBE3B-208ENST00000538070 RBM7Q9Y580 266 aaKnown RBP7.56□□□□□ -1.2
UBE3B-208ENST00000538070 ZFHX4Q86UP3 3567 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 A0A0U1RQV5 110 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 LOC102725191A0A1B0GVB3 256 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 IFNA21P01568 189 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF728P0DKX0 622 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 PRF1P14222 555 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 SELEP16581 610 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 CNR1P21554 472 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 PTGER4P35408 488 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 UBA52P62987 128 aaKnown RBP7.55□□□□□ -1.2
UBE3B-208ENST00000538070 IKZF1Q13422 519 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 SMCO1Q147U7 214 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 KCNMB1Q16558 191 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 OR2A2Q6IF42 318 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 TMEM88Q6PEY1 159 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 ATRAIDQ6UW56 229 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 OSR2Q8N2R0 312 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 TMEM251Q8N6I4 163 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 EMG1Q92979 244 aaKnown RBP7.55□□□□□ -1.2
UBE3B-208ENST00000538070 MARS2Q96GW9 593 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms