RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ATP6V1G1O75348 118 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 AHSA1O95433 338 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 SNAP29O95721 258 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 CD55P08174 381 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 RPS2P15880 293 aaKnown RBP4.05□□□□□ -1.76
CLIP1-207ENST00000536634 GCAP28676 217 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 GRPRP30550 384 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 IER3P46695 156 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 SERPINB9P50453 376 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 ABCE1P61221 599 aaKnown RBP4.05□□□□□ -1.76
CLIP1-207ENST00000536634 GNB2P62879 340 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 TNFAIP6P98066 277 aaPredicted RBP4.05□□□□□ -1.76
CLIP1-207ENST00000536634 HOXC5Q00444 222 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 HERPUD1Q15011 391 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 MAPK11Q15759 364 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 SMU1Q2TAY7 513 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 GPAT3Q53EU6 434 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 CCDC92Q53HC0 331 aaPredicted RBP4.05□□□□□ -1.76
CLIP1-207ENST00000536634 THEM4Q5T1C6 240 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 ATAD3BQ5T9A4 648 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 FAM91A1Q658Y4 838 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 ZNF836Q6ZNA1 936 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 RNF165Q6ZSG1 346 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 ZCCHC23Q6ZST2 131 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 RFPL4BQ6ZWI9 263 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 ANKRD46Q86W74 232 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 VRK2Q86Y07 508 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 RIMKLAQ8IXN7 391 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 PEX5LQ8IYB4 626 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 SLC22A24Q8N4F4 322 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 SLC25A40Q8TBP6 338 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 PNPT1Q8TCS8 783 aaKnown RBP4.05□□□□□ -1.76
CLIP1-207ENST00000536634 KLF14Q8TD94 323 aaPredicted RBP4.05□□□□□ -1.76
CLIP1-207ENST00000536634 TBX15Q96SF7 602 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 ULBP2Q9BZM5 246 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 BCL2L14Q9BZR8 327 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 FNDC4Q9H6D8 234 aaPredicted RBP4.05□□□□□ -1.76
CLIP1-207ENST00000536634 DNAJC15Q9Y5T4 150 aa4.05□□□□□ -1.76
CLIP1-207ENST00000536634 IGKV1D-42A0A075B6H8 117 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 LOC102725191A0A1B0GVB3 256 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 BOLA2-SMG1P6H3BVE0 249 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 AIM2O14862 343 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 AZIN1O14977 448 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 TNFSF12O43508 249 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 CYB5R3P00387 301 aaPredicted RBP4.04□□□□□ -1.76
CLIP1-207ENST00000536634 SNRPAP09012 282 aaKnown RBP4.04□□□□□ -1.76
CLIP1-207ENST00000536634 MYL2P10916 166 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 GP9P14770 177 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 UQCRBP14927 111 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 IGLL1P15814 213 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 CCNOP22674 350 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 GTF2E2P29084 291 aaKnown RBP4.04□□□□□ -1.76
CLIP1-207ENST00000536634 PHBP35232 272 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 CFHR2P36980 270 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 MDH2P40926 338 aaKnown RBP4.04□□□□□ -1.76
CLIP1-207ENST00000536634 RANBP1P43487 201 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 CTAG1AP78358 180 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 HPCAP84074 193 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 CAV1Q03135 178 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 BST1Q10588 318 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 TBC1D28Q2M2D7 210 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 NSUN5P1Q3KNT7 163 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 LRRC37A5PQ49AS3 106 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 XKR7Q5GH72 579 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 DEFB121Q5J5C9 76 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 IL23RQ5VWK5 629 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 OR4F3Q6IEY1 312 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 ZYG11AQ6WRX3 759 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 TIFABQ6ZNK6 161 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 Q6ZR03 302 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 Q6ZVQ6 151 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 CEACAM19Q7Z692 300 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 PDZD9Q8IXQ8 264 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 SPATA4Q8NEY3 305 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 OR4K5Q8NGD3 323 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 OR4A15Q8NGL6 344 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 OR6N1Q8NGY5 312 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 ZNF420Q8TAQ5 688 aaPredicted RBP4.04□□□□□ -1.76
CLIP1-207ENST00000536634 TWIST2Q8WVJ9 160 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 C10orf82Q8WW14 230 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 ITLN1Q8WWA0 313 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 SH3GL1Q99961 368 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 OR2J1Q9GZK6 312 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 NANOGQ9H9S0 305 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 ACOXLQ9NUZ1 547 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 TMEM38BQ9NVV0 291 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 ZMAT5Q9UDW3 170 aaKnown RBP4.04□□□□□ -1.76
CLIP1-207ENST00000536634 FBXL3Q9UKT7 428 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 UTP11Q9Y3A2 253 aaKnown RBP4.04□□□□□ -1.76
CLIP1-207ENST00000536634 GMEB1Q9Y692 573 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 SAR1BQ9Y6B6 198 aa4.04□□□□□ -1.76
CLIP1-207ENST00000536634 A0A087WUJ7 227 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 A0A096LPI6 279 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 IGHV1-69DA0A0B4J2H0 117 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 IQCMA0A1B0GVH7 501 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 FAM25EA8MYX2 175 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 TMEM114B3SHH9 223 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 LRRN3E7EW58 273 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms