RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 MKXQ8IYA7 352 aa11.68□□□□□ -0.54
RTN3P1-201ENST00000536295 PRSS35Q8N3Z0 413 aa11.68□□□□□ -0.54
RTN3P1-201ENST00000536295 OR5D13Q8NGL4 314 aa11.68□□□□□ -0.54
RTN3P1-201ENST00000536295 C17orf50Q8WW18 174 aa11.68□□□□□ -0.54
RTN3P1-201ENST00000536295 RFKQ969G6 155 aa11.68□□□□□ -0.54
RTN3P1-201ENST00000536295 VPREB3Q9UKI3 123 aa11.68□□□□□ -0.54
RTN3P1-201ENST00000536295 SLC7A11Q9UPY5 501 aa11.68□□□□□ -0.54
RTN3P1-201ENST00000536295 RNF114Q9Y508 228 aa11.68□□□□□ -0.54
RTN3P1-201ENST00000536295 ORC6Q9Y5N6 252 aa11.68□□□□□ -0.54
RTN3P1-201ENST00000536295 LOC107986453A0A1B0GWG9 222 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 EI24O14681 340 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 ENTPD6O75354 484 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 PIPP12273 146 aaPredicted RBP11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 MPZP25189 248 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 ZNF85Q03923 595 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 ACSM1Q08AH1 577 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 KPNB1Q14974 876 aaKnown RBP11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 TMEM200BQ69YZ2 307 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 DHRS7BQ6IAN0 325 aaPredicted RBP11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 HCP5Q6MZN7 132 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 Q6ZSR3 168 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 RDH10Q8IZV5 341 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 LINC01006Q8NI28 216 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 HES4Q9HCC6 221 aa11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 SF3B6Q9Y3B4 125 aaKnown RBP11.67□□□□□ -0.54
RTN3P1-201ENST00000536295 MGAM2Q2M2H8 2515 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 IGKV1-27A0A075B6S5 117 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 A0A1W2PPH5 198 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 MEX3AA1L020 520 aaKnown RBP11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 GATBO75879 557 aaKnown RBP11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 TK1P04183 234 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 ALPLP05186 524 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 CCL3L1P16619 93 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 COX7A1P24310 79 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 KIR3DL2P43630 455 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 KRTAP10-3P60369 221 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 ERVFRD-1P60508 538 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 IL24Q13007 206 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 TMED1Q13445 227 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 Q6ZSV7 163 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 ASCC1Q8N9N2 400 aaKnown RBP11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 SLAMF9Q96A28 289 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 RNFT2Q96EX2 444 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 PKIBQ9C010 78 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 CHST5Q9GZS9 411 aa11.66□□□□□ -0.54
RTN3P1-201ENST00000536295 DAPL1A0PJW8 107 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 F8VVB4 439 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 F8VWA3 439 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 H3BNX3 289 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 H3BUX3 64 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 WIPF1O43516 503 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 SERPINA3P01011 423 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 UBCP0CG48 685 aaKnown RBP11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 PAX6P26367 422 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 FUT6P51993 359 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 ERVK11-1P61568 191 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 COL10A1Q03692 680 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 ZNF273Q14593 569 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 ZNF782Q6ZMW2 699 aaPredicted RBP11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 CCDC121Q6ZUS5 278 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 SLC25A26Q70HW3 274 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 ZSCAN4Q8NAM6 433 aaPredicted RBP11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 OR5R1Q8NH85 324 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 TRUB1Q8WWH5 349 aaKnown RBP11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 BORCS8Q96FH0 119 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 HRASLS5Q96KN8 279 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 CEP19Q96LK0 163 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 CITED1Q99966 193 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 PPA2Q9H2U2 334 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 USE1Q9NZ43 259 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 MTCH1Q9NZJ7 389 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 AASSQ9UDR5 926 aa11.65□□□□□ -0.54
RTN3P1-201ENST00000536295 ALDH3A2P51648 485 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 BMXP51813 675 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 EDDM3BP56851 147 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 OR12D2P58182 307 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 ISL1P61371 349 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 CNN3Q15417 329 aaKnown RBP11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 LY6EQ16553 131 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 MIDNQ504T8 468 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 EGFL6Q8IUX8 553 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 CBR4Q8N4T8 237 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 CCDC54Q8NEL0 328 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 OR2G2Q8NGZ5 317 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 ADAT3Q96EY9 351 aaPredicted RBP11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 SSX3Q99909 188 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 HEXA-AS1Q9H8Q6 139 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 PKD1L1Q8TDX9 2849 aa11.64□□□□□ -0.55
RTN3P1-201ENST00000536295 hCG_1809904A0A1W2PP81 198 aa11.63□□□□□ -0.55
RTN3P1-201ENST00000536295 A0A1W2PPE2 198 aa11.63□□□□□ -0.55
RTN3P1-201ENST00000536295 A0A1W2PR64 198 aa11.63□□□□□ -0.55
RTN3P1-201ENST00000536295 A0A1W2PRV1 198 aa11.63□□□□□ -0.55
RTN3P1-201ENST00000536295 K7N7A8 449 aa11.63□□□□□ -0.55
RTN3P1-201ENST00000536295 CHRM2P08172 466 aa11.63□□□□□ -0.55
RTN3P1-201ENST00000536295 CALCBP10092 127 aa11.63□□□□□ -0.55
RTN3P1-201ENST00000536295 ZNF20P17024 532 aa11.63□□□□□ -0.55
RTN3P1-201ENST00000536295 TGFBR2P37173 567 aa11.63□□□□□ -0.55
RTN3P1-201ENST00000536295 POU3F4P49335 361 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms