RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 AK3Q9UIJ7 227 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 TIMM10BQ9Y5J6 103 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 ARID1AO14497 2285 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 ZNF716A6NP11 495 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 ZNF850A8MQ14 1090 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 K7EPK0 472 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 TERTO14746 1132 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 DEDDO75618 318 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 JTBO76095 146 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 NRASP01111 189 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 ZNF32P17041 273 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 CHATP28329 748 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 RRADP55042 308 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 HGFACQ04756 655 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 SPEM2Q0P670 501 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 SMCO1Q147U7 214 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 GUCA2BQ16661 112 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 RPL7L1Q6DKI1 246 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 AAED1Q7RTV5 226 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 YRDCQ86U90 279 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 GGNQ86UU5 652 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 ZNF100Q8IYN0 542 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 FAM71E2Q8N5Q1 922 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 OR14L1PQ8NHC6 308 aa13.94□□□□□ -0.18
CHMP1A-202ENST00000535997 TNRC6BQ9UPQ9 1833 aaKnown RBP13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 GAPDHP04406 335 aaKnown RBP13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 IL32P24001 234 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 CAV2P51636 162 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 RIPPLY2Q5TAB7 128 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 WDR5BQ86VZ2 330 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 LDLRAD3Q86YD5 345 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 FOXRED2Q8IWF2 684 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 UBALD2Q8IYN6 164 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 SPAG16Q8N0X2 631 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 LIME1Q9H400 295 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 TREM1Q9NP99 234 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 MSTNO14793 375 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 LRP3O75074 770 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 SNAPINO95295 136 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 FCGR3AP08637 254 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 PIGPP57054 158 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 PCBD1P61457 104 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 PSG4Q00888 419 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 GGNBP1Q5YKI7 109 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 H3F3CQ6NXT2 135 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 GALNT14Q96FL9 552 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 PRRX2Q99811 253 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 HRH4Q9H3N8 390 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 RHOFQ9HBH0 211 aa13.93□□□□□ -0.18
CHMP1A-202ENST00000535997 B4GALT1P15291 398 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 OPRM1P35372 400 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 HTR5AP47898 357 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 SULT1A2P50226 295 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 FUT6P51993 359 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 FAM219AQ8IW50 185 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 AKR7LQ8NHP1 331 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 FOXB1Q99853 325 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 SULT4A1Q9BR01 284 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 BCO1Q9HAY6 547 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 PLEKHA2Q9HB19 425 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 IL36GQ9NZH8 169 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 NDRG3Q9UGV2 375 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 H7C2Y5 167 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 ZNF728P0DKX0 622 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 FLI1Q01543 452 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 OR2A2Q6IF42 318 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 OSR2Q8N2R0 312 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 OR10AD1Q8NGE0 317 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 OR2H1Q9GZK4 316 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 SLC7A11Q9UPY5 501 aa13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 MRPS18CQ9Y3D5 142 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-202ENST00000535997 VPS13AQ96RL7 3174 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 MASP2O00187 686 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 GEMIN2O14893 280 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 FCGR2CP31995 323 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 TMEM33P57088 247 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 FAM3AP98173 230 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 PDZK1IP1Q13113 114 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 ABCA11PQ4W5N1 156 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 TMEM268Q5VZI3 342 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 DHRS7BQ6IAN0 325 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 HAGHLQ6PII5 290 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 LRTM2Q8N967 370 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 RTN4IP1Q8WWV3 396 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 MRPL24Q96A35 216 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 TECTBQ96PL2 329 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 ALKBH3Q96Q83 286 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 PRO3102Q9H379 93 aa13.91□□□□□ -0.18
CHMP1A-202ENST00000535997 CXCL13O43927 109 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 PATE4P0C8F1 98 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 RGS19P49795 217 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 TMEM187Q14656 261 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 PEAR1Q5VY43 1037 aaPredicted RBP13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 OR2V1Q8NHB1 315 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 MAFAQ8NHW3 353 aaPredicted RBP13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 POM121Q96HA1 1249 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 ADGRG7Q96K78 797 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 SUCNR1Q9BXA5 334 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 NAA60Q9H7X0 242 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 PARP11Q9NR21 331 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms