RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 CPNE2Q96FN4 548 aaPredicted RBP11.45□□□□□ -0.58
LDLR-203ENST00000535915 CYTL1Q9NRR1 136 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 TCFL5Q9UL49 500 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 IGKV1-27A0A075B6S5 117 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 TRAV20A0A0B4J274 112 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 F10P00742 488 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 IFNA2P01563 188 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 PET100P0DJ07 73 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 RBMXP38159 391 aaKnown RBP11.45□□□□□ -0.58
LDLR-203ENST00000535915 RBP2P50120 134 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 FOXRED2Q8IWF2 684 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 SLC30A7Q8NEW0 376 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 TMED6Q8WW62 240 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 FOXB1Q99853 325 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 COA4Q9NYJ1 87 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 ANXA10Q9UJ72 324 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 GLAP06280 429 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 LYL1P12980 280 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 RRADP55042 308 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 PSG4Q00888 419 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 NAAAQ02083 359 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 CEACAM16Q2WEN9 425 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 PABPC1L2AQ5JQF8 200 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 NSUN5P2Q63ZY6 315 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 ZNF585AQ6P3V2 769 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 POC1AQ8NBT0 407 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 SMOC1Q9H4F8 434 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 C1orf123Q9NWV4 160 aa11.45□□□□□ -0.58
LDLR-203ENST00000535915 CELSR3Q9NYQ7 3312 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 ZDBF2Q9HCK1 2354 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 OR6C6A6NF89 314 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 LRRC3CA6NJW4 275 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 FGF16O43320 207 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 GDF1P27539 372 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 ECI1P42126 302 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 ACER2Q5QJU3 275 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 SGPP2Q8IWX5 399 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 OR2V1Q8NHB1 315 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 RNF141Q8WVD5 230 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 NKX6-2Q9C056 277 aaPredicted RBP11.44□□□□□ -0.58
LDLR-203ENST00000535915 OR2S2Q9NQN1 319 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 ZNF581Q9P0T4 197 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 AK3Q9UIJ7 227 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 PURGQ9UJV8 347 aaKnown RBP11.44□□□□□ -0.58
LDLR-203ENST00000535915 EDARQ9UNE0 448 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 MEMO1Q9Y316 297 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 B4E171 279 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 RRP8O43159 456 aaKnown RBP11.44□□□□□ -0.58
LDLR-203ENST00000535915 NRASP01111 189 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 OPRM1P35372 400 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 TSPAN7P41732 249 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 LHFPL2Q6ZUX7 228 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 AQP10Q96PS8 301 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 CMSS1Q9BQ75 279 aaKnown RBP11.44□□□□□ -0.58
LDLR-203ENST00000535915 ESRP2Q9H6T0 727 aaKnown RBP11.44□□□□□ -0.58
LDLR-203ENST00000535915 DEPPQ9NTK1 212 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 TIMM10BQ9Y5J6 103 aa11.44□□□□□ -0.58
LDLR-203ENST00000535915 FREM1Q5H8C1 2179 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 RAB19A4D1S5 217 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 ZNF850A8MQ14 1090 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 LINC00587B1AMM8 73 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 OR5H8P0DN80 308 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 AKR1C2P52895 323 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 AKR1C1Q04828 323 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 LPAL2Q16609 132 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 CCDC157Q569K6 752 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 UQCC3Q6UW78 93 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 TMEM200AQ86VY9 491 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 FGFBP3Q8TAT2 258 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 OR2H1Q9GZK4 316 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 PMS2P1A4D2B8 440 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 MSTNO14793 375 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 CYB561P49447 251 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 RAB13P51153 203 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 RBM39Q14498 530 aaKnown RBP11.43□□□□□ -0.58
LDLR-203ENST00000535915 IAH1Q2TAA2 248 aaPredicted RBP11.43□□□□□ -0.58
LDLR-203ENST00000535915 ABLIM2Q6H8Q1 611 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 SLC23A3Q6PIS1 610 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 BRICD5Q6PL45 260 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 ABHD3Q8WU67 409 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 CT55Q8WUE5 264 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 ADGRG7Q96K78 797 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 NDRG3Q9UGV2 375 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 HSF4Q9ULV5 492 aa11.43□□□□□ -0.58
LDLR-203ENST00000535915 COL27A1Q8IZC6 1860 aaPredicted RBP11.43□□□□□ -0.58
LDLR-203ENST00000535915 GEMIN2O14893 280 aaKnown RBP11.42□□□□□ -0.58
LDLR-203ENST00000535915 CTSDP07339 412 aaPredicted RBP11.42□□□□□ -0.58
LDLR-203ENST00000535915 CLDN15P56746 228 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 IL15RAQ13261 267 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 PIGYQ3MUY2 71 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 C6orf15Q6UXA7 325 aaPredicted RBP11.42□□□□□ -0.58
LDLR-203ENST00000535915 SKA3Q8IX90 412 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 TOMM40LQ969M1 308 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 ZNF845Q96IR2 970 aaPredicted RBP11.42□□□□□ -0.58
LDLR-203ENST00000535915 SULT4A1Q9BR01 284 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 WNT5BQ9H1J7 359 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 GPR35Q9HC97 309 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 BIN3Q9NQY0 253 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 NECAP2Q9NVZ3 263 aa11.42□□□□□ -0.58
LDLR-203ENST00000535915 LOXL2Q9Y4K0 774 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms