RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 IQCF3P0C7M6 154 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 MCF2P10911 925 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 CXCR1P25024 350 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 ELK4P28324 431 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 CDK5R1Q15078 307 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 LINC00303Q3SY05 128 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 TTMPQ5BVD1 217 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 ANGPTL8Q6UXH0 198 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 Q6ZTI0 123 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 FAM231DQ6ZW35 169 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 CMTM1Q8IZ96 169 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 ZNF555Q8NEP9 628 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 SPATA4Q8NEY3 305 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 OR10W1Q8NGF6 305 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 OR2T34Q8NGX1 318 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 OR2T3Q8NH03 318 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 ERMNQ8TAM6 284 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 C2orf15Q8WU43 125 aaKnown RBP-0.42□□□□□ -2.48
COPB1-212ENST00000534771 APH1AQ96BI3 265 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 SGTBQ96EQ0 304 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 SLC35G5Q96KT7 338 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 Q96M85 177 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 UQCC2Q9BRT2 126 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 SRRQ9GZT4 340 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 NIT2Q9NQR4 276 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 TREX1Q9NSU2 369 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 STK38LQ9Y2H1 464 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 MINOS1-NBL1R4GNA1 71 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 URGCP-MRPS24S4R325 110 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 TECTAO75443 2155 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 TNXBP22105 4242 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 ATP8B3O60423 1300 aa-0.42□□□□□ -2.48
COPB1-212ENST00000534771 FLNCQ14315 2725 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 IGSF10Q6WRI0 2623 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 NOS1P29475 1434 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 LOC102725191A0A1B0GVB3 256 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 VPS37CA5D8V6 355 aaPredicted RBP-0.43□□□□□ -2.48
COPB1-212ENST00000534771 SMCO2A6NFE2 343 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 H7C0C1 242 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 GABRPO00591 440 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 GEMIN2O14893 280 aaKnown RBP-0.43□□□□□ -2.48
COPB1-212ENST00000534771 LECT2O14960 151 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 ZBTB5O15062 677 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 EEF1E1O43324 174 aaKnown RBP-0.43□□□□□ -2.48
COPB1-212ENST00000534771 ERI3O43414 337 aaKnown RBP-0.43□□□□□ -2.48
COPB1-212ENST00000534771 SLC16A7O60669 478 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 SH2D1AO60880 128 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 ERCC1P07992 297 aaPredicted RBP-0.43□□□□□ -2.48
COPB1-212ENST00000534771 ANXA5P08758 320 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 STMN1P16949 149 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 GPX2P18283 190 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 ATF1P18846 271 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 IMPA1P29218 277 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 CRABP1P29762 137 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 SLC1A1P43005 524 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 ATP5OP48047 213 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 FABP6P51161 128 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 RAP1GDS1P52306 607 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 RELAQ04206 551 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 SRSF6Q13247 344 aaKnown RBP-0.43□□□□□ -2.48
COPB1-212ENST00000534771 TRAM2Q15035 370 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 STEAP4Q687X5 459 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 HORMAD1Q86X24 394 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 FAM19A2Q8N3H0 131 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 OR5T3Q8NGG3 340 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 ZNRF2Q8NHG8 242 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 HIST1H2BAQ96A08 127 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 CCDC47Q96A33 483 aaKnown RBP-0.43□□□□□ -2.48
COPB1-212ENST00000534771 SMARCD1Q96GM5 515 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 PRRC1Q96M27 445 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 GABRG3Q99928 467 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 MRPL20Q9BYC9 149 aaKnown RBP-0.43□□□□□ -2.48
COPB1-212ENST00000534771 OR2D2Q9H210 308 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 RIBC2Q9H4K1 309 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 TMEM38AQ9H6F2 299 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 RMND5AQ9H871 391 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 POLE3Q9NRF9 147 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 PUS1Q9Y606 427 aaKnown RBP eCLIP-0.43□□□□□ -2.48
COPB1-212ENST00000534771 USH1CQ9Y6N9 552 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 POLEQ07864 2286 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 CACNA1EQ15878 2313 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 NUP205Q92621 2012 aa-0.43□□□□□ -2.48
COPB1-212ENST00000534771 NSD2O96028 1365 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 PLEKHG2Q9H7P9 1386 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 NCOR2Q9Y618 2525 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 GRIFINA4D1Z8 144 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 OR52A4PA6NMU1 304 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 A8MWP6 167 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 PLEKHA8P1O95397 391 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 GPR75O95800 540 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 BAG2O95816 211 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 GUSBP08236 651 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 ZNF24P17028 368 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 RAB4AP20338 218 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 PSMA5P28066 241 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 OR1E1P30953 314 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 ATP6V1E1P36543 226 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 CEBPDP49716 269 aaPredicted RBP-0.44□□□□□ -2.48
COPB1-212ENST00000534771 AP1S2P56377 157 aa-0.44□□□□□ -2.48
COPB1-212ENST00000534771 SEC61GP60059 68 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 539.7 ms