RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 ERICH4A6NGS2 130 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 EVPLLA8MZ36 301 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 C12orf77C9JDV5 145 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 AP4M1O00189 453 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 HSPA12AO43301 675 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 TBX1O43435 398 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 TK1P04183 234 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 FAM106CPP0CH98 169 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 TROVE2P10155 538 aaKnown RBP eCLIP4.97□□□□□ -1.61
CD44-237ENST00000534082 PRDX2P32119 198 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 GPR4P46093 362 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 SLC1A6P48664 564 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 PRKXP51817 358 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 CRYBA2P53672 197 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 PRDX4Q13162 271 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 SMIM21Q3B7S5 101 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 KLHL12Q53G59 568 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 LGALS9CQ6DKI2 356 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 ACSM6Q6P461 480 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 CATSPERDQ86XM0 798 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 FTMTQ8N4E7 242 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 CSNK2A3Q8NEV1 391 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 OR4C15Q8NGM1 316 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 OR5P3Q8WZ94 311 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 ARPC1AQ92747 370 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 REEP6Q96HR9 211 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 COPS4Q9BT78 406 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 GON7Q9BXV9 100 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 GHITMQ9H3K2 345 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 TUBA4BQ9H853 241 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 GNB4Q9HAV0 340 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 PYCARDQ9ULZ3 195 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 MPC1Q9Y5U8 109 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 TNCP24821 2201 aa4.97□□□□□ -1.61
CD44-237ENST00000534082 DNAH5Q8TE73 4624 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 OR6C68A6NDL8 312 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 LINC01548A6NM66 108 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 ZNF850A8MQ14 1090 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 LEUTXA8MZ59 168 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 I3L521 148 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 PSMD9O00233 223 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 CDC42EP2O14613 210 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 FGF16O43320 207 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 TPPPO94811 219 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 IGHG4P01861 327 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 HLA-DQA2P01906 255 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 OR8U9P0C7N5 309 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 TMEM11P17152 192 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 HOXA5P20719 270 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 MNDAP41218 407 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 RPS27P42677 84 aaKnown RBP4.96□□□□□ -1.62
CD44-237ENST00000534082 CDKN2AP42771 156 aaKnown RBP4.96□□□□□ -1.62
CD44-237ENST00000534082 GPR12P47775 334 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 OR1E2P47887 323 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 GPM6AP51674 278 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 EDDM3BP56851 147 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 GNB1P62873 340 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 BDH1Q02338 343 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 PRKCDQ05655 676 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 ST3GAL3Q11203 375 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 EIF2B1Q14232 305 aaKnown RBP4.96□□□□□ -1.62
CD44-237ENST00000534082 SNCBQ16143 134 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 GFOD2Q3B7J2 385 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 ZBED5Q49AG3 693 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 FAM76BQ5HYJ3 339 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 PAGE3Q5JUK9 113 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 TPTE2P1Q5T6R2 138 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 CCDC144NLQ6NUI1 221 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 TMEM65Q6PI78 240 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 CEMP1Q6PRD7 247 aaPredicted RBP4.96□□□□□ -1.62
CD44-237ENST00000534082 LINC00336Q6ZUF6 198 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 ZDHHC21Q8IVQ6 265 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 ZNF596Q8TC21 504 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 RASSF5Q8WWW0 418 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 DLX4Q92988 240 aaPredicted RBP4.96□□□□□ -1.62
CD44-237ENST00000534082 RNF170Q96K19 258 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 ZNF488Q96MN9 340 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 OR5B12Q96R08 314 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 OR8B4Q96RC9 309 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 TMED9Q9BVK6 235 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 NSRP1Q9H0G5 558 aaKnown RBP4.96□□□□□ -1.62
CD44-237ENST00000534082 ABCB9Q9NP78 766 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 NRIP3Q9NQ35 241 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.96□□□□□ -1.62
CD44-237ENST00000534082 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.96□□□□□ -1.62
CD44-237ENST00000534082 B9D1Q9UPM9 204 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 CEPT1Q9Y6K0 416 aa4.96□□□□□ -1.62
CD44-237ENST00000534082 MAGEA13PA6NCF6 341 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 TRPC5OSA6NMA1 111 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 UBDO15205 165 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 NDUFB2O95178 105 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 SERPINA1P01009 418 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 IGLV1-47P01700 117 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 ANXA2P07355 339 aaKnown RBP4.95□□□□□ -1.62
CD44-237ENST00000534082 PSKH1P11801 424 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 CFL1P23528 166 aaKnown RBP4.95□□□□□ -1.62
CD44-237ENST00000534082 PSMB8P28062 276 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 CEACAM3P40198 252 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 KIR3DL2P43630 455 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms