RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 KDELR3O43731 214 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 TTC4O95801 387 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 TRGV3P03979 118 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 CTSGP08311 255 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 SLC35G6P0C7Q6 338 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 RALBP11234 206 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 GFAPP14136 432 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 ZNF708P17019 499 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 HLA-GP17693 338 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 SLC6A1P30531 599 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 FUSP35637 526 aaKnown RBP eCLIP0.96□□□□□ -2.26
BRCA2-205ENST00000533776 ARL2P36404 184 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 PEX19P40855 299 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 MAGEA1P43355 309 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 TAS2R39P59534 338 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 SLC35A1P78382 337 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 LCN2P80188 198 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 RPL18AQ02543 176 aaKnown RBP0.96□□□□□ -2.26
BRCA2-205ENST00000533776 DNAJC3Q13217 504 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 CAVIN4Q5BKX8 364 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 MRPL2Q5T653 305 aaKnown RBP0.96□□□□□ -2.26
BRCA2-205ENST00000533776 TTC19Q6DKK2 380 aaPredicted RBP0.96□□□□□ -2.26
BRCA2-205ENST00000533776 TMPPEQ6ZT21 453 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 SLC7A5P1Q8MH63 180 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 DAW1Q8N136 415 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 TRAM1L1Q8N609 369 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 INO80EQ8NBZ0 244 aaPredicted RBP0.96□□□□□ -2.26
BRCA2-205ENST00000533776 ORAOV1Q8WV07 137 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 KIAA1143Q96AT1 154 aaPredicted RBP0.96□□□□□ -2.26
BRCA2-205ENST00000533776 RNF170Q96K19 258 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 PPP1R36Q96LQ0 422 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 NAP1L5Q96NT1 182 aaPredicted RBP0.96□□□□□ -2.26
BRCA2-205ENST00000533776 GABRG3Q99928 467 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 RDH14Q9HBH5 336 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 ABCB9Q9NP78 766 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 RAB23Q9ULC3 237 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 ACOT9Q9Y305 439 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 COL11A1P12107 1806 aaPredicted RBP0.96□□□□□ -2.26
BRCA2-205ENST00000533776 JCADQ9P266 1359 aa0.96□□□□□ -2.26
BRCA2-205ENST00000533776 TRAV8-4A0A0B4J246 113 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 GGTLC3B5MD39 225 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 H3BN98 237 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 J3QT63 122 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 ZNF73O43830 326 aaPredicted RBP0.95□□□□□ -2.26
BRCA2-205ENST00000533776 NDUFS5O43920 106 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 HSBP1O75506 76 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 LCA5LO95447 670 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 OTCP00480 354 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 P01737 135 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 OR4Q2P0C623 313 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 TEAD1P28347 426 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 CCT6AP40227 531 aaKnown RBP0.95□□□□□ -2.26
BRCA2-205ENST00000533776 PSMB2P49721 201 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 NUDT2P50583 147 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 ATP5J2P56134 94 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 TRDNQ13061 729 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 LINC00303Q3SY05 128 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 FBXL19-AS1Q494R0 122 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 THOC7Q6I9Y2 204 aaKnown RBP0.95□□□□□ -2.26
BRCA2-205ENST00000533776 EPGNQ6UW88 154 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 Q6ZS52 159 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 BBOF1Q8ND07 529 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 OR5H2Q8NGV7 314 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 CACNG8Q8WXS5 425 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 OR8D1Q8WZ84 308 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 OR5P3Q8WZ94 311 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 TFGQ92734 400 aaPredicted RBP0.95□□□□□ -2.26
BRCA2-205ENST00000533776 ISOC2Q96AB3 205 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 CERS2Q96G23 380 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 SLC25A44Q96H78 314 aaPredicted RBP0.95□□□□□ -2.26
BRCA2-205ENST00000533776 ZNF649Q9BS31 505 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 IL22Q9GZX6 179 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 BLZF1Q9H2G9 400 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 OR51B5Q9H339 312 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 RGCCQ9H4X1 137 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 MRPL22Q9NWU5 206 aaKnown RBP0.95□□□□□ -2.26
BRCA2-205ENST00000533776 TRAPPC1Q9Y5R8 145 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 NPHP4O75161 1426 aaPredicted RBP0.95□□□□□ -2.26
BRCA2-205ENST00000533776 SPATA31E1Q6ZUB1 1445 aa0.95□□□□□ -2.26
BRCA2-205ENST00000533776 MROH5Q6ZUA9 1318 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 A0A0B4J2C4 111 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 LOC100653049A0A140TA62 436 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 A0A1W2PNM2 257 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 MYBPHLA2RUH7 354 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 ZNF701M0R085 212 aaPredicted RBP0.94□□□□□ -2.26
BRCA2-205ENST00000533776 RGS5O15539 181 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 KRT34O76011 436 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 SMC2O95347 1197 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 GCGP01275 180 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 IGHV3-53P01767 116 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 PAX6P26367 422 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 IVDP26440 423 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 GABRR2P28476 465 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 CSKP41240 450 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 CLDN6P56747 220 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 YWHAEP62258 255 aaKnown RBP0.94□□□□□ -2.26
BRCA2-205ENST00000533776 RPL10AP62906 217 aaKnown RBP0.94□□□□□ -2.26
BRCA2-205ENST00000533776 XIAPP98170 497 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 LAMTOR4Q0VGL1 99 aa0.94□□□□□ -2.26
BRCA2-205ENST00000533776 PMVKQ15126 192 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms