RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 TFAP2EQ6VUC0 442 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 SCCPDHQ8NBX0 429 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 OR10G8Q8NGN5 311 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 RNF133Q8WVZ7 376 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 TLNRD1Q9H1K6 362 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 CXorf36Q9H7Y0 433 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 GNG12Q9UBI6 72 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 KCNK7Q9Y2U2 307 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 WIPI2Q9Y4P8 454 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 OR4C45A6NMZ5 311 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 DRGXA6NNA5 263 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 SLC17A3O00476 420 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 CD14P08571 375 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 CTXN2P0C2S0 81 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 AOAHP28039 575 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 RIPPLY3P57055 190 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 SLC37A1P57057 533 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 RPL11P62913 178 aaKnown RBP7.06□□□□□ -1.28
CSRP1-218ENST00000533402 ERV3-1Q14264 604 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 PLA1AQ53H76 456 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 LINC00346Q8IVM7 164 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 SIRT6Q8N6T7 355 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 BARHL1Q9BZE3 327 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 SLC25A37Q9NYZ2 338 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 CEP290O15078 2479 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 NPIPB9F8W1W9 429 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 NDUFS6O75380 124 aaKnown RBP7.06□□□□□ -1.28
CSRP1-218ENST00000533402 PIAS2O75928 621 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 HPXP02790 462 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 SRFP11831 508 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 CD1CP29017 333 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
CSRP1-218ENST00000533402 OR10AD1Q8NGE0 317 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 PFN4Q8NHR9 129 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 CMC2Q9NRP2 79 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 DOCK6Q96HP0 2047 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 TRGV8A0A0C4DH27 118 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 CXCL2P19875 107 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 HERPUD1Q15011 391 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 LTC4SQ16873 150 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 FGF13Q92913 245 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 ASCL3Q9NQ33 180 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 LOC107986453A0A1B0GWG9 222 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 PRAMEF25A6NGN4 478 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 PRAMEF4O60810 478 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 ONECUT2O95948 504 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 FPR2P25090 351 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 GNB2P62879 340 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 RTN4RL1Q86UN2 441 aaPredicted RBP7.06□□□□□ -1.28
CSRP1-218ENST00000533402 OR2Y1Q8NGV0 311 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 EID2BQ96D98 161 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 SLC35E1Q96K37 410 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 TMPRSS13Q9BYE2 586 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 SLC25A19Q9HC21 320 aa7.06□□□□□ -1.28
CSRP1-218ENST00000533402 ZNF236Q9UL36 1845 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 MYADML2A6NDP7 307 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 OR8B8Q15620 311 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 MRPL43Q8N983 215 aaKnown RBP7.05□□□□□ -1.28
CSRP1-218ENST00000533402 APOOQ9BUR5 198 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 USP3Q9Y6I4 520 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 OR5B21A6NL26 309 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 FXYD1O00168 92 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 TAZQ16635 292 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 TBC1D28Q2M2D7 210 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 LINC01465Q8N7H1 131 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 GJC3Q8NFK1 279 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 WNT2BQ93097 391 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 STARD10Q9Y365 291 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 OR51B4Q9Y5P0 310 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 MDKP21741 143 aaPredicted RBP7.05□□□□□ -1.28
CSRP1-218ENST00000533402 P2RY4P51582 365 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 NUDT8Q8WV74 236 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 PIGTQ969N2 578 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 PIK3IP1Q96FE7 263 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 MANBALQ9NQG1 85 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 UNC13CQ8NB66 2214 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 PRSS1P07477 247 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 OPRM1P35372 400 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 OR52N4Q8NGI2 321 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 SNURFLB1AK76 121 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 PTGESO14684 152 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 MBPP02686 304 aaPredicted RBP7.05□□□□□ -1.28
CSRP1-218ENST00000533402 EXOSC7Q15024 291 aaKnown RBP7.05□□□□□ -1.28
CSRP1-218ENST00000533402 SMAD2Q15796 467 aaKnown RBP7.05□□□□□ -1.28
CSRP1-218ENST00000533402 LRRC18Q8N456 261 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 ZCCHC14Q8WYQ9 949 aaKnown RBP7.05□□□□□ -1.28
CSRP1-218ENST00000533402 DNMT3BQ9UBC3 853 aaKnown RBP7.05□□□□□ -1.28
CSRP1-218ENST00000533402 CACFD1Q9UGQ2 172 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 TINAGQ9UJW2 476 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 VDAC3Q9Y277 283 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 PIGLQ9Y2B2 252 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 ANKRD20A5PA0PJZ0 165 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 CRYM-AS1A6NIL9 109 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 IER3P46695 156 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 PCBP3P57721 371 aaKnown RBP7.05□□□□□ -1.28
CSRP1-218ENST00000533402 ERGIC1Q969X5 290 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 HIST1H2BAQ96A08 127 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 NDUFAF3Q9BU61 184 aa7.05□□□□□ -1.28
CSRP1-218ENST00000533402 WDR61Q9GZS3 305 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms