RNA–Protein interactions for RNA: ENST00000532339.1

CD44-235, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-235ENST00000532339 COL8A2P25067 703 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 CASP1P29466 404 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 AQP1P29972 269 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 TGFBR2P37173 567 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 RPS15AP62244 130 aaKnown RBP2.65□□□□□ -1.99
CD44-235ENST00000532339 OGDHQ02218 1023 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 PRDX1Q06830 199 aaKnown RBP2.65□□□□□ -1.99
CD44-235ENST00000532339 SSX2Q16385 188 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 LRRC36Q1X8D7 754 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 DEFB134Q4QY38 66 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 PAGE2BQ5JRK9 111 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 Q6ZT83 130 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 NANOGNBQ7Z5D8 188 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 CTAGE6Q86UF2 777 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 SPERTQ8NA61 448 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 BBOF1Q8ND07 529 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 JOSD2Q8TAC2 188 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 FGGYQ96C11 551 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 RASD2Q96D21 266 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 DNAJC1Q96KC8 554 aaKnown RBP2.65□□□□□ -1.99
CD44-235ENST00000532339 OXGR1Q96P68 337 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 KCNA7Q96RP8 456 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 DOK1Q99704 481 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 EBNA1BP2Q99848 306 aaKnown RBP2.65□□□□□ -1.99
CD44-235ENST00000532339 TM2D3Q9BRN9 247 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 PKIBQ9C010 78 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 ANKRD19PQ9H560 264 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 DHX35Q9H5Z1 703 aaKnown RBP2.65□□□□□ -1.99
CD44-235ENST00000532339 REEP4Q9H6H4 257 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 ZNF702PQ9H963 129 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 NHEJ1Q9H9Q4 299 aaPredicted RBP2.65□□□□□ -1.99
CD44-235ENST00000532339 DYNLRB1Q9NP97 96 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 MMP26Q9NRE1 261 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 SPATA7Q9P0W8 599 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 COPS3Q9UNS2 423 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 INSIG2Q9Y5U4 225 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 SLC25A15Q9Y619 301 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 NPTNQ9Y639 398 aa2.65□□□□□ -1.99
CD44-235ENST00000532339 IGKV1D-8A0A087WSZ0 117 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 IGHV7-81A0A0B4J1V7 117 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 TRAV40A0A0B4J280 105 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 A0A0G2JRQ6 117 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 TCRBV9S1A1TA0A576 114 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 hCG_2039718K7EN88 272 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 HSD17B6O14756 317 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 LYPLA1O75608 230 aaPredicted RBP2.64□□□□□ -1.99
CD44-235ENST00000532339 RP2O75695 350 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 CIB2O75838 187 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 LSM8O95777 96 aaKnown RBP2.64□□□□□ -1.99
CD44-235ENST00000532339 CLIC3O95833 236 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 IGHMP01871 453 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 SEMG1P04279 462 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 IFNA16P05015 189 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 P0C879 139 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 CALCRP30988 508 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 RPA3P35244 121 aaPredicted RBP2.64□□□□□ -1.99
CD44-235ENST00000532339 PKNOX1P55347 436 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 FBXW4P57775 412 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 ZCWPW2Q504Y3 356 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 OR52E8Q6IFG1 317 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 ACOT7LQ6ZUV0 252 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 PGAP1Q75T13 922 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 MOB1BQ7L9L4 216 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 GLT6D1Q7Z4J2 308 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 NRMQ8IXM6 262 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 OR52H1Q8NGJ2 320 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 ZNF721Q8TF20 911 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 DNAJA4Q8WW22 397 aaPredicted RBP2.64□□□□□ -1.99
CD44-235ENST00000532339 CHCHD10Q8WYQ3 142 aaPredicted RBP2.64□□□□□ -1.99
CD44-235ENST00000532339 UFD1Q92890 307 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 CLCC1Q96S66 551 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 FMO2Q99518 471 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 ZNF184Q99676 751 aaPredicted RBP2.64□□□□□ -1.99
CD44-235ENST00000532339 GAL3ST1Q99999 423 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 NMUR2Q9GZQ4 415 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 RBKSQ9H477 322 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 NMRAL1Q9HBL8 299 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 PRTFDC1Q9NRG1 225 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 INPP5EQ9NRR6 644 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 PAQR5Q9NXK6 330 aaPredicted RBP2.64□□□□□ -1.99
CD44-235ENST00000532339 BFARQ9NZS9 450 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 SLC7A8Q9UHI5 535 aa2.64□□□□□ -1.99
CD44-235ENST00000532339 MCTS1Q9ULC4 181 aaKnown RBP2.64□□□□□ -1.99
CD44-235ENST00000532339 IQANK1A0A1B0GTG1 560 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 H0Y9J4 135 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 TRAPPC2LH3BP13 241 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 SERF1AO75920 110 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 IGHV3-48P01763 117 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 IGKV3-11P04433 115 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 CRYGBP07316 175 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 ADRA2AP08913 450 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 CD28P10747 220 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 ZNF19P17023 458 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 CCNCP24863 283 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 DDOSTP39656 456 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 KIR2DS4P43632 304 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 XIAPP98170 497 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 AVPI1Q5T686 147 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 LGALS9CQ6DKI2 356 aa2.63□□□□□ -1.99
CD44-235ENST00000532339 CLEC6AQ6EIG7 209 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms