RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 RORBQ92753 470 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 FAM71F1Q96KD3 344 aaPredicted RBP5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 SLC22A4Q9H015 551 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 NIPAL2Q9H841 368 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 SP140LQ9H930 580 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 GPR84Q9NQS5 396 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 IMPAD1Q9NX62 359 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 RNF7Q9UBF6 113 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF69Q9UC07 566 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 GTF2A1LQ9UNN4 478 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 TPRKBQ9Y3C4 175 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 GMPPBQ9Y5P6 360 aa5.8□□□□□ -1.48
TRIM53CP-201ENST00000531490 IGHV3OR15-7A0A075B7D8 119 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 IGHV3OR16-10A0A075B7F0 116 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 A0A0U1RQV5 110 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 A0A1B0GW55 424 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 METTL15A6NJ78 407 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 ACOD1A6NK06 481 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 A6NLC8 198 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 F5H0A9 414 aaPredicted RBP5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 P2RY10O00398 339 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 CDIPTO14735 213 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 CST4P01036 141 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 TFF1P04155 84 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 DUX4L2P0CJ85 424 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 DUX4L3P0CJ86 424 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 DUX4L4P0CJ87 422 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 DUX4L5P0CJ88 424 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 DUX4L6P0CJ89 424 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 DUX4L7P0CJ90 424 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 CD80P33681 288 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 MDH2P40926 338 aaKnown RBP5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 MTNR1AP48039 350 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR12D2P58182 307 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 GMFBP60983 142 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 BAMBIQ13145 260 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF404Q494X3 552 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 TP53I3Q53FA7 332 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 KIAA2026Q5HYC2 2103 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 FAM76BQ5HYJ3 339 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 C6orf141Q5SZD1 244 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 DUX4L9Q6RFH8 374 aaPredicted RBP5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 RBMS3Q6XE24 437 aaKnown RBP5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF841Q6ZN19 808 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 KRT74Q7RTS7 529 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 LHFPL3Q86UP9 236 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 KLBQ86Z14 1044 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 ELMOD2Q8IZ81 293 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 FGFRL1Q8N441 504 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 YIPF7Q8N8F6 280 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 SPERTQ8NA61 448 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR1M1Q8NGA1 313 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR8S1Q8NH09 359 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 APH1BQ8WW43 257 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 HPSE2Q8WWQ2 592 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR5P3Q8WZ94 311 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 RPL3LQ92901 407 aaKnown RBP5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 ERGIC1Q969X5 290 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 RAB39BQ96DA2 213 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 DGCR14Q96DF8 476 aaKnown RBP5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 LGALS12Q96DT0 336 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 RNFT2Q96EX2 444 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 RNF170Q96K19 258 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 ZNF649Q9BS31 505 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 PAPOLGQ9BWT3 736 aaKnown RBP5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 RGCCQ9H4X1 137 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 OPA3Q9H6K4 179 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 DUX4Q9UBX2 424 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 NUFIP1Q9UHK0 495 aaKnown RBP5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 OR52A1Q9UKL2 312 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 PIGLQ9Y2B2 252 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 SNX5Q9Y5X3 404 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 R4GMQ9 66 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 TENM3Q9P273 2699 aa5.79□□□□□ -1.48
TRIM53CP-201ENST00000531490 hCG_1807616A0A1W2PRN6 198 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 TRIM64CA6NLI5 447 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 LRRC30A6NM36 301 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 LOC110117498-PIK3R3F6TDL0 507 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 IFNL4K9M1U5 179 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 PHYHO14832 338 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 WBP4O75554 376 aaKnown RBP5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 RHBDL1O75783 438 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 GYPAP02724 150 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 PRB2P02812 416 aaPredicted RBP5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 KRT8P05787 483 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 GNAO1P09471 354 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 IRF2P14316 349 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 ATP6V1B1P15313 513 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 CFL1P23528 166 aaKnown RBP5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 EEF1B2P24534 225 aaKnown RBP5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 GNALP38405 381 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 GPM6AP51674 278 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 KRTAP10-3P60369 221 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 ISL1P61371 349 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 IL5RAQ01344 420 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 PAX2Q02962 417 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 RIPPLY1Q0D2K3 151 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 TMED1Q13445 227 aa5.78□□□□□ -1.48
TRIM53CP-201ENST00000531490 SLC9A3R2Q15599 337 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms