RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ZNRF1Q8ND25 227 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 OR52I1Q8NGK6 324 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 GATAD2BQ8WXI9 593 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 GCDHQ92947 438 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 BORCS8Q96FH0 119 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 JAM3Q9BX67 310 aa9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 FGF20Q9NP95 211 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC4-209ENST00000528230 IGKV1-27A0A075B6S5 117 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 TRBV23-1A0A0A0MS06 115 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 IRGMA1A4Y4 181 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 DNAJC9-AS1A6NH13 148 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 H3BSH0 61 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 M0R1W7 72 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 SLC1A7O00341 560 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 KNG1P01042 644 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 RNASE1P07998 156 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 ATF1P18846 271 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 PRKACBP22694 351 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 RBP2P50120 134 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 ATP1B3P54709 279 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 ZNF691Q5VV52 312 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 VMO1Q7Z5L0 202 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 DHRSXQ8N5I4 330 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 CD177Q8N6Q3 437 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 SETD9Q8NE22 299 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 TRMT10AQ8TBZ6 339 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 NPRL2Q8WTW4 380 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 H1FXQ92522 213 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 LHX4Q969G2 390 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 ZDHHC16Q969W1 377 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 SLC25A28Q96A46 364 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 FGGYQ96C11 551 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 ADAT3Q96EY9 351 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 C1orf147Q96MC9 270 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 ZNF488Q96MN9 340 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 FAM234AQ9H0X4 552 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 UNKLQ9H9P5 680 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 SEBOXQ9HB31 216 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 ONECUT1Q9UBC0 465 aa9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 SOX21Q9Y651 276 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-209ENST00000528230 CASQ2O14958 399 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 ALX3O95076 343 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 MT-ND2P03891 347 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 TFF1P04155 84 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 CCDC159P0C7I6 412 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 HKR1P10072 659 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 ZNF20P17024 532 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 DCKP27707 260 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 GBX2P52951 348 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 ADARB1P78563 741 aaKnown RBP9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 IL18R1Q13478 541 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 BLMHQ13867 455 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 RCN1Q15293 331 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 SLC9A3R2Q15599 337 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 LRRC36Q1X8D7 754 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 DEFB112Q30KQ8 113 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 Q6YL49 198 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 MKXQ8IYA7 352 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 Q8IYB0 196 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 TMEM86BQ8N661 226 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 Q8N7P7 452 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 ZNF676Q8N7Q3 588 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 TMEM185AQ8NFB2 350 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 TBC1D15Q8TC07 691 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 SPSB1Q96BD6 273 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 CEP19Q96LK0 163 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 ISG20L2Q9H9L3 353 aaKnown RBP9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 NEK6Q9HC98 313 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 MTCH1Q9NZJ7 389 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 HSPE1-MOB4S4R3N1 261 aa9.96□□□□□ -0.82
TRAPPC4-209ENST00000528230 DSCAML1Q8TD84 2053 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 IGKV1-9A0A0C4DH69 117 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 A0A1W2PPH5 198 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 A0A1W2PQ09 198 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 TMEM212A6NML5 194 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 CYB5AP00167 134 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 CHRM2P08172 466 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 LIMS3P0CW19 117 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 LIMS4P0CW20 117 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 AZGP1P25311 298 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 PEX2P28328 305 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 MTCP1P56278 107 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 FOXL1Q12952 345 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 SMN1Q16637 294 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 CCDC58Q4VC31 144 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 OGFRL1Q5TC84 451 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 RUSC1-AS1Q66K80 236 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 NCR3LG1Q68D85 454 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 C16orf87Q6PH81 154 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 LHFPL2Q6ZUX7 228 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 SLC25A26Q70HW3 274 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR13C3Q8NGS6 347 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR5AK2Q8NH90 309 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 CYGBQ8WWM9 190 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 COMMD4Q9H0A8 199 aa9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 METTL8Q9H825 291 aaKnown RBP9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 CAB39Q9Y376 341 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC4-209ENST00000528230 STAB1Q9NY15 2570 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 MDFIC2A0A1B0GVS7 189 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms