RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SOX2P48431 317 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 RAG2P55895 527 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 LOXL3P58215 753 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 TAS2R43P59537 309 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 RPS25P62851 125 aaKnown RBP9.07□□□□□ -0.96
NEDD8-204ENST00000526430 ZNF154Q13106 437 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 YIF1BQ5BJH7 314 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 FAM201AQ5SY85 155 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 UTS2BQ765I0 119 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 ZNF367Q7RTV3 350 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 COMMD2Q86X83 199 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 CALHM1Q8IU99 346 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 BCL6BQ8N143 479 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-204ENST00000526430 SPERTQ8NA61 448 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 SCCPDHQ8NBX0 429 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 OR5A2Q8NGI9 324 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 OR51A2Q8NGJ7 313 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 GPR148Q8TDV2 347 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 RNF170Q96K19 258 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 OR14A2Q96R54 314 aa9.07□□□□□ -0.96
NEDD8-204ENST00000526430 ADAT1Q9BUB4 502 aaKnown RBP9.07□□□□□ -0.96
NEDD8-204ENST00000526430 TRAV8-7A0A075B6U6 113 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 CLPSL1A2RUU4 121 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 MAGEA13PA6NCF6 341 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 ZNF732B4DXR9 585 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 G3V4G9 280 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-204ENST00000526430 RHBDL1O75783 438 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 TNFAIP8O95379 198 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 GRPP07492 148 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 HSMCR30P0CW71 290 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 CFHR2P36980 270 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 SRP9P49458 86 aaKnown RBP9.06□□□□□ -0.96
NEDD8-204ENST00000526430 FABP5Q01469 135 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 ZNF181Q2M3W8 571 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 Q499Y3 187 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 ZMAT1Q5H9K5 638 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 KLF17Q5JT82 389 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-204ENST00000526430 FAM27D1Q5T7N8 215 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 SAMD5Q5TGI4 173 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 CD200R1LQ6Q8B3 271 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 WDR82Q6UXN9 313 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 C9orf139Q6ZV77 190 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 KCTD8Q6ZWB6 473 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 MOGAT3Q86VF5 341 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 ZDHHC23Q8IYP9 409 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 GCSAMQ8N6F7 178 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 TSPAN14Q8NG11 270 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 OR13C3Q8NGS6 347 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 MRAPQ8TCY5 172 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 RPL3LQ92901 407 aaKnown RBP9.06□□□□□ -0.96
NEDD8-204ENST00000526430 TMEM203Q969S6 136 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 MUL1Q969V5 352 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 DERL3Q96Q80 235 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 COMMD4Q9H0A8 199 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 SAP30LQ9HAJ7 183 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 DECR2Q9NUI1 292 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 TMEM106BQ9NUM4 274 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 UFSP2Q9NUQ7 469 aa9.06□□□□□ -0.96
NEDD8-204ENST00000526430 A0A1W2PPK0 400 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 SHISA3A0PJX4 238 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 ZNF879B4DU55 563 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 F8VVB4 439 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 F8VWA3 439 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 TMEM178BH3BS89 294 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 FCN3O75636 299 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 CYB5R3P00387 301 aaPredicted RBP9.05□□□□□ -0.96
NEDD8-204ENST00000526430 ZNF12P17014 697 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 AMY2BP19961 511 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 TGFBR2P37173 567 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 GPM6AP51674 278 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 ACSM3Q53FZ2 586 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 ANGPTL5Q86XS5 388 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 SERPINA12Q8IW75 414 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 SVOPQ8N4V2 548 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 MS4A15Q8N5U1 240 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 DEFB108BQ8NET1 73 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 PP6455Q8WZ26 134 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 AQP3Q92482 292 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 CCL17Q92583 94 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 TMEM106AQ96A25 262 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 SEH1LQ96EE3 360 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 GFI1Q99684 422 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 TMED9Q9BVK6 235 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 ZCCHC4Q9H5U6 513 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 TMEM165Q9HC07 324 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 TAS2R4Q9NYW5 299 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 DHDHQ9UQ10 334 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 PPP1R3CQ9UQK1 317 aa9.05□□□□□ -0.96
NEDD8-204ENST00000526430 A0A087WXM4 84 aa9.04□□□□□ -0.96
NEDD8-204ENST00000526430 IGKV1-12A0A0C4DH73 117 aa9.04□□□□□ -0.96
NEDD8-204ENST00000526430 FAM181BA6NEQ2 426 aa9.04□□□□□ -0.96
NEDD8-204ENST00000526430 OR5B21A6NL26 309 aa9.04□□□□□ -0.96
NEDD8-204ENST00000526430 CDIPTO14735 213 aa9.04□□□□□ -0.96
NEDD8-204ENST00000526430 SYNGR1O43759 233 aa9.04□□□□□ -0.96
NEDD8-204ENST00000526430 CLPXO76031 633 aa9.04□□□□□ -0.96
NEDD8-204ENST00000526430 ZNF205O95201 554 aa9.04□□□□□ -0.96
NEDD8-204ENST00000526430 IGKV1D-12P01611 117 aa9.04□□□□□ -0.96
NEDD8-204ENST00000526430 IGHV2-70P01814 119 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms