RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 MARC2Q969Z3 335 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 BIRC8Q96P09 236 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 DOK1Q99704 481 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 EMC6Q9BV81 110 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 MRIQ9BWK5 157 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 THSD7BQ9C0I4 1608 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 DMAC2Q9NW81 257 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 RBFOX1Q9NWB1 397 aaKnown RBP4.08□□□□□ -1.76
USP47-204ENST00000525078 GID8Q9NWU2 228 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 ZNF226Q9NYT6 803 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 KLK13Q9UKR3 277 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 ZNF608Q9ULD9 1512 aaPredicted RBP4.08□□□□□ -1.76
USP47-204ENST00000525078 SIGLEC7Q9Y286 467 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 MOB4Q9Y3A3 225 aa4.08□□□□□ -1.76
USP47-204ENST00000525078 GON4LQ3T8J9 2241 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 TRAV8-2A0A0B4J237 113 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 SERF1AO75920 110 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 MOSP00540 346 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 BGLAPP02818 100 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 CTSLP07711 333 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 SPNP16150 400 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 ZNF30P17039 623 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 AKR1C4P17516 323 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 TAC1P20366 129 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 ADORA1P30542 326 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 APLNRP35414 380 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 MDH2P40926 338 aaKnown RBP4.07□□□□□ -1.76
USP47-204ENST00000525078 CYB561P49447 251 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 ACOT2P49753 483 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 CCL23P55773 120 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 RAB25P57735 213 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 IFITM3Q01628 133 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 HERPUD1Q15011 391 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 SLC9A3R2Q15599 337 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 TMEM236Q5W0B7 351 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 TNFAIP8L2Q6P589 184 aaPredicted RBP4.07□□□□□ -1.76
USP47-204ENST00000525078 CLEC19AQ6UXS0 136 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 FBXW12Q6X9E4 464 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 RNF165Q6ZSG1 346 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 COMMD7Q86VX2 200 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 OR4C13Q8NGP0 309 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 PPCDCQ96CD2 204 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 PHB2Q99623 299 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 OPRPNQ99935 248 aaPredicted RBP4.07□□□□□ -1.76
USP47-204ENST00000525078 SFXN3Q9BWM7 321 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 SUCNR1Q9BXA5 334 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 FBXL15Q9H469 300 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 SCRT2Q9NQ03 307 aa4.07□□□□□ -1.76
USP47-204ENST00000525078 SNAPC4Q5SXM2 1469 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 RIMS2Q9UQ26 1411 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 CIAO1O76071 339 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 CNIH1O95406 144 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 TRBV12-3P01733 135 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 IGHV3-23P01764 117 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 UCHL3P15374 230 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 PSMB1P20618 241 aaKnown RBP4.06□□□□□ -1.76
USP47-204ENST00000525078 ME2P23368 584 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 CD79BP40259 229 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 LGALS7P47929 136 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 SULT1A1P50225 295 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 SULT1A2P50226 295 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 SYNJ2BPP57105 145 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 HERVK_113P61574 105 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 TIMM10P62072 90 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 GINS1Q14691 196 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 TCEAL5Q5H9L2 206 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 CASC10Q5T4H9 136 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 DGAT2L6Q6ZPD8 337 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 RIMKLAQ8IXN7 391 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 Q8N377 158 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 TBC1D19Q8N5T2 526 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 GATD1Q8NB37 220 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 ZNF485Q8NCK3 441 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 FAM172AQ8WUF8 416 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 GTSF1Q8WW33 167 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 ASB13Q8WXK3 278 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 TCEAL3Q969E4 200 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 ANKRD9Q96BM1 317 aaPredicted RBP4.06□□□□□ -1.76
USP47-204ENST00000525078 SMIM8Q96KF7 97 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 TIPINQ9BVW5 301 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 PECRQ9BY49 303 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 ZNF702PQ9H963 129 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 ZNF581Q9P0T4 197 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 LSM5Q9Y4Y9 91 aaKnown RBP4.06□□□□□ -1.76
USP47-204ENST00000525078 ARL5AQ9Y689 179 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 ENPP4Q9Y6X5 453 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 RB1CC1Q8TDY2 1594 aa4.06□□□□□ -1.76
USP47-204ENST00000525078 WRNQ14191 1432 aaPredicted RBP eCLIP4.05□□□□□ -1.76
USP47-204ENST00000525078 PDS5BQ9NTI5 1447 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 FLT4P35916 1363 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 PALLDQ8WX93 1383 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 PLEKHG1Q9ULL1 1385 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 PSMD12O00232 456 aaPredicted RBP4.05□□□□□ -1.76
USP47-204ENST00000525078 MANBAO00462 879 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 KPNA3O00505 521 aaPredicted RBP4.05□□□□□ -1.76
USP47-204ENST00000525078 PSPHP1O15172 72 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 FADS1O60427 444 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 GABARAPO95166 117 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 NTN1O95631 604 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 ZNF17P17021 662 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms