RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 MIDNQ504T8 468 aa13.2□□□□□ -0.3
IGHV3-42-201ENST00000520410 PLA1AQ53H76 456 aa13.2□□□□□ -0.3
IGHV3-42-201ENST00000520410 ZNF782Q6ZMW2 699 aaPredicted RBP13.2□□□□□ -0.3
IGHV3-42-201ENST00000520410 Q6ZSV7 163 aa13.2□□□□□ -0.3
IGHV3-42-201ENST00000520410 OR5R1Q8NH85 324 aa13.2□□□□□ -0.3
IGHV3-42-201ENST00000520410 RORBQ92753 470 aa13.2□□□□□ -0.3
IGHV3-42-201ENST00000520410 RFKQ969G6 155 aa13.2□□□□□ -0.3
IGHV3-42-201ENST00000520410 SSX3Q99909 188 aa13.2□□□□□ -0.3
IGHV3-42-201ENST00000520410 USE1Q9NZ43 259 aa13.2□□□□□ -0.3
IGHV3-42-201ENST00000520410 PQLC2LA1A4F0 135 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 KCNAB3O43448 404 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 GATBO75879 557 aaKnown RBP13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 SERPINA3P01011 423 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 OR2T7P0C7T2 308 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 CCL3L1P16619 93 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 PAX6P26367 422 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 HTR1FP30939 366 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 POLR2IP36954 125 aaKnown RBP13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 TGFBR2P37173 567 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 SNU13P55769 128 aaKnown RBP13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 DEFA6Q01524 100 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 TP53I3Q53FA7 332 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 C1orf122Q6ZSJ8 110 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 TNFRSF14Q92956 283 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 SLAMF9Q96A28 289 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 BORCS8Q96FH0 119 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 NKX3-1Q99801 234 aaPredicted RBP13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 FAM234AQ9H0X4 552 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 HEXA-AS1Q9H8Q6 139 aa13.19□□□□□ -0.3
IGHV3-42-201ENST00000520410 A0A1B0GTI1 187 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 ZNF20P17024 532 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 POU3F4P49335 361 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 BMXP51813 675 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 ERVFRD-1P60508 538 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 COL10A1Q03692 680 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 EDDM3AQ14507 147 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 CNN3Q15417 329 aaKnown RBP13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 LRRC75BQ2VPJ9 315 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 GDPD3Q7L5L3 318 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 CATSPERDQ86XM0 798 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 CALHM1Q8IU99 346 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 OR8J1Q8NGP2 316 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 C17orf50Q8WW18 174 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 PYDC1Q8WXC3 89 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 EMG1Q92979 244 aaKnown RBP13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 CENPNQ96H22 339 aaPredicted RBP13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 CEP19Q96LK0 163 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 CITED1Q99966 193 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 RBM4BQ9BQ04 359 aaKnown RBP13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 NRIP2Q9BQI9 281 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 FAM53CQ9NYF3 392 aa13.18□□□□□ -0.3
IGHV3-42-201ENST00000520410 LOC107986453A0A1B0GWG9 222 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 CYB5AP00167 134 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 TK1P04183 234 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 GABRA5P31644 462 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 KRTAP10-3P60369 221 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 DYNC1I2Q13409 638 aaKnown RBP13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 ZNF273Q14593 569 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 TMEM42Q69YG0 159 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 TMEM200BQ69YZ2 307 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 ZSCAN4Q8NAM6 433 aaPredicted RBP13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 BEND2Q8NDZ0 799 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 OR4C13Q8NGP0 309 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 EME1Q96AY2 570 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 GABARAPL3Q9BY60 117 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 PKIBQ9C010 78 aa13.17□□□□□ -0.3
IGHV3-42-201ENST00000520410 DAPL1A0PJW8 107 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 DHRS7CA6NNS2 312 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 ARG1P05089 322 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 UBCP0CG48 685 aaKnown RBP13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 GABRR1P24046 479 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 FUT6P51993 359 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 IL24Q13007 206 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 ZIK1Q3SY52 487 aaPredicted RBP13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 ARSJQ5FYB0 599 aaPredicted RBP13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 SLC25A26Q70HW3 274 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 KRT74Q7RTS7 529 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 EGFL6Q8IUX8 553 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 FAM110DQ8TAY7 271 aaPredicted RBP13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 MMP27Q9H306 513 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 ABCB10Q9NRK6 738 aa13.16□□□□□ -0.3
IGHV3-42-201ENST00000520410 NOS1APO75052 506 aaPredicted RBP13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 SULT1C4O75897 302 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 CLPXO76031 633 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 CHRM2P08172 466 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 CALCBP10092 127 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 CCL1P22362 96 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 ATP1B3P54709 279 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 PROK1P58294 105 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 EFNB1P98172 346 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 UBE2V2Q15819 145 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 FAM189A2Q15884 450 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 SLC35E4Q6ICL7 350 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 HCP5Q6MZN7 132 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 Q6ZTK2 550 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 TRAPPC6BQ86SZ2 158 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 RDH10Q8IZV5 341 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 RNFT2Q96EX2 444 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 OSBPL10Q9BXB5 764 aa13.15□□□□□ -0.3
IGHV3-42-201ENST00000520410 NEK6Q9HC98 313 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms