RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.42□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 IGKV1D-37A0A075B6S9 117 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 IGHV3-43A0A0B4J1X8 118 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 F5H5P2 479 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 H0Y8G0 127 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 KLRC4-KLRK1H3BQV0 150 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 K7EPK0 472 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ISLRO14498 428 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 RNF13O43567 381 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 WBP4O75554 376 aaKnown RBP0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 HLA-AP01891 365 aaKnown RBP0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 G6PCP35575 357 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 UQCRFS1P47985 274 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SULT1E1P49888 294 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 ACTR3P61158 418 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 THOC7Q6I9Y2 204 aaKnown RBP0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CLEC18BQ6UXF7 455 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 FAM228AQ86W67 206 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 RBM45Q8IUH3 476 aaKnown RBP0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MFSD8Q8NHS3 518 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 C2orf15Q8WU43 125 aaKnown RBP0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 C8orf44Q96CB5 159 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 PYURFQ96I23 114 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 CRACR2AQ9BSW2 395 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 SRRQ9GZT4 340 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 RBM22Q9NW64 420 aaKnown RBP eCLIP0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MCUBQ9NWR8 336 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 LYARQ9NX58 379 aaKnown RBP0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MICAL3Q7RTP6 2002 aa0.41□□□□□ -2.34
RNU6-1088P-201ENST00000516850 MROH7Q68CQ1 1323 aa0.4□□□□□ -2.34
RNU6-1088P-201ENST00000516850 A6NED7 52 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 FNDC10F2Z333 226 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 F8VP50 259 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 OR2A4O95047 310 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ETHE1O95571 254 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 HMOX2P30519 316 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 CASP8Q14790 479 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ANKDD1AQ495B1 522 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 SLC7A5P1Q8MH63 180 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ZCCHC24Q8N2G6 241 aaKnown RBP0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 TEX9Q8N6V9 391 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ZNF555Q8NEP9 628 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 OR4C16Q8NGL9 310 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 OR51F2Q8NH61 342 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 SCGB3A2Q96PL1 93 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 OR2A7Q96R45 310 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 NAA38Q9BRA0 125 aaKnown RBP0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 AICDAQ9GZX7 198 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ARV1Q9H2C2 271 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 PLEKHG2Q9H7P9 1386 aa0.4□□□□□ -2.35
RNU6-1088P-201ENST00000516850 RGS12O14924 1447 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 SLIT2O94813 1529 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 PLPP3O14495 311 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 POP7O75817 140 aaKnown RBP0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 TDP2O95551 362 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 CTLA4P16410 223 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 PSMB9P28065 219 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 RGS8P57771 180 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 RPL10AP62906 217 aaKnown RBP0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 LAMTOR4Q0VGL1 99 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 LINC00303Q3SY05 128 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 Q6ZRN7 208 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 C10orf126Q8N4M7 172 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 C10orf105Q8TEF2 133 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ING5Q8WYH8 240 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 NUP58Q9BVL2 599 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 MFSD1Q9H3U5 465 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 REEP1Q9H902 201 aa0.39□□□□□ -2.35
RNU6-1088P-201ENST00000516850 TRBV24-1A0A075B6N3 115 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 TRGV2A0A075B6R0 118 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 BICDL2A1A5D9 508 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 C17orf98A8MV24 154 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ZBTB5O15062 677 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 NDUFS5O43920 106 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ZNF189O75820 626 aaPredicted RBP0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 TTC4O95801 387 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 HLA-HP01893 362 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 GTF2F2P13984 249 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 HTR2CP28335 458 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 COILP38432 576 aaPredicted RBP0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 UBE2MP61081 183 aaKnown RBP0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 SLC35A1P78382 337 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 C16orf87Q6PH81 154 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ANGPTL8Q6UXH0 198 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 Q6ZRU5 148 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 CENPQQ7L2Z9 268 aaPredicted RBP0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 NDUFAF7Q7L592 441 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 SLC25A45Q8N413 288 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 CYB561A3Q8NBI2 242 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 OR4C5Q8NGB2 326 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 OR10Z1Q8NGY1 313 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 TPD52L3Q96J77 140 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 MTG1Q9BT17 334 aaPredicted RBP0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 TSGA10Q9BZW7 698 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 TDRD3Q9H7E2 651 aaKnown RBP0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 ANKRA2Q9H9E1 313 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 TAS2R9Q9NYW1 312 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 COX16Q9P0S2 106 aa0.38□□□□□ -2.35
RNU6-1088P-201ENST00000516850 OR5V1Q9UGF6 321 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms