RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 UBE3DQ7Z6J8 389 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 APH1BQ8WW43 257 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 AUNIPQ9H7T9 357 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 V9GYS6 101 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 DOCK10Q96BY6 2186 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 CLEC18AA5D8T8 446 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 SULT1C4O75897 302 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 CDC20Q12834 499 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 ARHGEF39Q8N4T4 335 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 CLEC18CQ8NCF0 446 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 ARHGAP5-AS1Q96IT6 56 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 SIAEQ9HAT2 523 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 TXNL1O43396 289 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 TINAGQ9UJW2 476 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 CT45A10P0DMU9 189 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 BCL3P20749 454 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 SNRPNP63162 240 aaKnown RBP12.77□□□□□ -0.37
TRIO-222ENST00000515144 CDK5R1Q15078 307 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 WDR38Q5JTN6 314 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 OR4F5Q8NH21 305 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 CORO2AQ92828 525 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 OR4F4Q96R69 305 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 RAXQ9Y2V3 346 aa12.77□□□□□ -0.37
TRIO-222ENST00000515144 SLC37A1P57057 533 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 C9orf40Q8IXQ3 194 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 OR52N4Q8NGI2 321 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 IL36GQ9NZH8 169 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 ERRFI1Q9UJM3 462 aaPredicted RBP12.76□□□□□ -0.37
TRIO-222ENST00000515144 IGHV3OR16-10A0A075B7F0 116 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 FABP7O15540 132 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 THBS4P35443 961 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 RPS4XP62701 263 aaKnown RBP12.76□□□□□ -0.37
TRIO-222ENST00000515144 ADGRL4Q9HBW9 690 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 SIGLEC7Q9Y286 467 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 CD3DP04234 171 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 CTLA4P16410 223 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 FAM122CQ6P4D5 195 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 JAM3Q9BX67 310 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 STRAPQ9Y3F4 350 aaKnown RBP12.76□□□□□ -0.37
TRIO-222ENST00000515144 RAF1P04049 648 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 CLDN20P56880 219 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 ARHGDIGQ99819 225 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 RPS10-NUDT3A0A1W2PQS6 291 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 PTHLHP12272 177 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 RPS10P46783 165 aaKnown RBP12.76□□□□□ -0.37
TRIO-222ENST00000515144 REG1BP48304 166 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 CLEC12BQ2HXU8 276 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 OR10R2Q8NGX6 335 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 C10orf90Q96M02 699 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 AMMECR1Q9Y4X0 333 aaPredicted RBP12.76□□□□□ -0.37
TRIO-222ENST00000515144 KLK4Q9Y5K2 254 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 IGHV1-45A0A0A0MS14 117 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 A0A0D9SG52 128 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 CDIPTO14735 213 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 DHRS3O75911 302 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 RFPL4BQ6ZWI9 263 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 DUS3LQ96G46 650 aaKnown RBP12.76□□□□□ -0.37
TRIO-222ENST00000515144 DDOQ99489 341 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 RASL11BQ9BPW5 248 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 ZNF416Q9BWM5 594 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 CLCF1Q9UBD9 225 aa12.76□□□□□ -0.37
TRIO-222ENST00000515144 PPP3CBP16298 524 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 S100A4P26447 101 aaKnown RBP12.75□□□□□ -0.37
TRIO-222ENST00000515144 TAGLN2P37802 199 aaKnown RBP12.75□□□□□ -0.37
TRIO-222ENST00000515144 SLC25A40Q8TBP6 338 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 PERPQ96FX8 193 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 KLK11Q9UBX7 282 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 AK3Q9UIJ7 227 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 CYC1P08574 325 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 OR5H8P0DN80 308 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 SIRT3Q9NTG7 399 aaPredicted RBP12.75□□□□□ -0.37
TRIO-222ENST00000515144 FOXJ2Q9P0K8 574 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 HILPDAQ9Y5L2 63 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 EP300Q09472 2414 aaPredicted RBP12.75□□□□□ -0.37
TRIO-222ENST00000515144 TCRBV5S2A0A599 114 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 PMS2P2O95744 297 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 TNXAQ16473 311 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 CDCP2Q5VXM1 449 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 MDP1Q86V88 176 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 KCNRGQ8N5I3 272 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 TMUB1Q9BVT8 246 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 LAMP3Q9UQV4 416 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 ANAPC1Q9H1A4 1944 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 A0A1W2PPV9 198 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 ASPDHA6ND91 283 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 IFITM5A6NNB3 132 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 ACKR3P25106 362 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 FBXO8Q9NRD0 319 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 IL11P20809 199 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 CD80P33681 288 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 OR8B12Q8NGG6 310 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 NUBPLQ8TB37 319 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 HSD17B10Q99714 261 aaKnown RBP12.75□□□□□ -0.37
TRIO-222ENST00000515144 BIN3Q9NQY0 253 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 MED9Q9NWA0 146 aa12.75□□□□□ -0.37
TRIO-222ENST00000515144 SCGB1D1O95968 90 aa12.74□□□□□ -0.37
TRIO-222ENST00000515144 MPGP29372 298 aa12.74□□□□□ -0.37
TRIO-222ENST00000515144 PTGFRP43088 359 aa12.74□□□□□ -0.37
TRIO-222ENST00000515144 LGALS7P47929 136 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms