RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 A0A1W2PRM7 423 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 MEIOCA2RUB1 952 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 J3QRE1 110 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 EI24O14681 340 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 SYT7O43581 403 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 GATBO75879 557 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 UBCP0CG48 685 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 CAPZA1P52907 286 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 KPNB1Q14974 876 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 UBE2V2Q15819 145 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 SLC25A30Q5SVS4 291 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 C17orf107Q6ZR85 190 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 FAM220AQ7Z4H9 259 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 BATF2Q8N1L9 274 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 LINC01006Q8NI28 216 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 TRMT10AQ8TBZ6 339 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 TRUB1Q8WWH5 349 aaKnown RBP8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 C10orf35Q96D05 121 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 HRASLS5Q96KN8 279 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 CITED1Q99966 193 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 IMPAD1Q9NX62 359 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 GNG8Q9UK08 70 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 SLC7A11Q9UPY5 501 aa8.54□□□□□ -1.04
HMGXB3-205ENST00000514469 VWFP04275 2813 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 A0A1W2PPH5 198 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 FAM230AA0A1W2PPH8 454 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 BTBD17A6NE02 478 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 H0YAE9 185 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 H3BSH0 61 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 ENTPD6O75354 484 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 PAHP00439 452 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 TK1P04183 234 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 ATP6V1E1P36543 226 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 ALDH3A2P51648 485 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 SNRPGP62308 76 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 RPL31P62899 125 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 ACTC1P68032 377 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 ACTA1P68133 377 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 SRSF4Q08170 494 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 MIDNQ504T8 468 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 TP53I3Q53FA7 332 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 DHRS7BQ6IAN0 325 aaPredicted RBP8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 ZFP1Q6P2D0 407 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 TREML4Q6UXN2 200 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 Q6ZSV7 163 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 ANGPTL5Q86XS5 388 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 MKXQ8IYA7 352 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 C11orf42Q8N5U0 333 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 ZSCAN4Q8NAM6 433 aaPredicted RBP8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 BEND2Q8NDZ0 799 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 OR5R1Q8NH85 324 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 PP6455Q8WZ26 134 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 UBE2FQ969M7 185 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 AJUBAQ96IF1 538 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 CEP19Q96LK0 163 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 FAM234AQ9H0X4 552 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 MTCH1Q9NZJ7 389 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 OR14J1Q9UGF5 321 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 SF3B6Q9Y3B4 125 aaKnown RBP8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 ORC6Q9Y5N6 252 aa8.53□□□□□ -1.04
HMGXB3-205ENST00000514469 F8VVB4 439 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 F8VWA3 439 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 K7N7A8 449 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 ANGPTL7O43827 346 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF737O75373 536 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 CLPXO76031 633 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 GABRB1P18505 474 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 FUT6P51993 359 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 PROK1P58294 105 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 KRTAP10-3P60369 221 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF273Q14593 569 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 CNN3Q15417 329 aaKnown RBP8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 OCLNQ16625 522 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 MEDAGQ5VYS4 303 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 TMEM200BQ69YZ2 307 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 FDX2Q6P4F2 183 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 BRICD5Q6PL45 260 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 KCTD20Q7Z5Y7 419 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 CBR4Q8N4T8 237 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 OR4M1Q8NGD0 313 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 OR2G2Q8NGZ5 317 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 C17orf50Q8WW18 174 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 SLAMF9Q96A28 289 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 RNFT2Q96EX2 444 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 BORCS8Q96FH0 119 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 MBOAT4Q96T53 435 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 ADI1Q9BV57 179 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 C16orf95Q9H693 158 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 RNF114Q9Y508 228 aa8.52□□□□□ -1.05
HMGXB3-205ENST00000514469 IGKV1-9A0A0C4DH69 117 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 SLC16A6O15403 523 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 WIPF1O43516 503 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 TSPAN9O75954 239 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 SERPINA3P01011 423 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 ISG15P05161 165 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 CCL3L1P16619 93 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 BMXP51813 675 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 DLX6P56179 175 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 NANOS3P60323 173 aaKnown RBP8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 COL10A1Q03692 680 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms