RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	OR6M1	Q8NGM8	313 aa		13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	EMG1	Q92979	244 aa	Known RBP	13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	C12orf43	Q96C57	262 aa	Known RBP	13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	GAL3ST1	Q99999	423 aa		13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	NRIP2	Q9BQI9	281 aa		13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	CENPO	Q9BU64	300 aa		13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	BPESC1	Q9GZL8	116 aa		13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	GHRL	Q9UBU3	117 aa		13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	GLS2	Q9UI32	602 aa		13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	AK6	Q9Y3D8	172 aa	Known RBP	13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495		V9GY05	133 aa		13.23	□□□□□ -0.29
SH3TC1-223	ENST00000513495	CCDC168	Q8NDH2	2452 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	IGHV4-30-2	A0A087WSY4	118 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	C3orf80	F5H4A9	247 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	ANGPTL7	O43827	346 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	HTR2C	P28335	458 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	ZP1	P60852	638 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	LSM3	P62310	102 aa	Known RBP	13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	ZMYND11	Q15326	602 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	RAB11B	Q15907	218 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	TMEM155	Q4W5P6	130 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	DEFB108B	Q8NET1	73 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	RAB2B	Q8WUD1	216 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	CNTD2	Q9H8S5	307 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	DCAF16	Q9NXF7	216 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	NLK	Q9UBE8	527 aa		13.22	□□□□□ -0.29
SH3TC1-223	ENST00000513495	NKX6-3	A6NJ46	265 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	VWC2L	B2RUY7	222 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	KDM4B	O94953	1096 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	GABARAP	O95166	117 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	ZNF205	O95201	554 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	IGHV2-70	P01814	119 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	ADRA2C	P18825	462 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	USF1	P22415	310 aa	Predicted RBP	13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	CPT2	P23786	658 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	SDC2	P34741	201 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	TMBIM6	P55061	237 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	C1orf100	Q5SVJ3	147 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	TEX36	Q5VZQ5	186 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	GLIPR1L1	Q6UWM5	242 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	ACP7	Q6ZNF0	438 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	NLRC3	Q7RTR2	1065 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	LRRC28	Q86X40	367 aa	Predicted RBP	13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	CROCCP3	Q8IVE0	287 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	FAM58A	Q8N1B3	248 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	TBC1D15	Q8TC07	691 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	RAB39B	Q96DA2	213 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	ZNF488	Q96MN9	340 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	BCL7B	Q9BQE9	202 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	CST11	Q9H112	138 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	IL36G	Q9NZH8	169 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	MTCH1	Q9NZJ7	389 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	MIOX	Q9UGB7	285 aa		13.21	□□□□□ -0.29
SH3TC1-223	ENST00000513495	CCDC160	A6NGH7	325 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	OR2AT4	A6NND4	320 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SLC17A2	O00624	439 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	WNT9B	O14905	357 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	CDRT1	O95170	752 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	HTR3B	O95264	441 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	KNG1	P01042	644 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	PRKACA	P17612	351 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	EGR1	P18146	543 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	BCL3	P20749	454 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	MXD1	Q05195	221 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ZNF404	Q494X3	552 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SLC22A6	Q4U2R8	563 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SPIN3	Q5JUX0	258 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	FAM201A	Q5SY85	155 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ASCL4	Q6XD76	172 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	DCDC5	Q6ZRR9	648 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	WFDC11	Q8NEX6	87 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	REG4	Q9BYZ8	158 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	DNTTIP1	Q9H147	329 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	WDR13	Q9H1Z4	485 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NARFL	Q9H6Q4	476 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	TMEM165	Q9HC07	324 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	RBFOX1	Q9NWB1	397 aa	Known RBP	13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	PDZD2	O15018	2839 aa		13.2	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IGHV3OR15-7	A0A075B7D8	119 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NBPF19	A0A087WUL8	3843 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IFITM5	A6NNB3	132 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	NOTO	A8MTQ0	251 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SLC22A1	O15245	554 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	BPNT1	O95861	308 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	IL1A	P01583	271 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	GTF2F2	P13984	249 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ARSB	P15848	533 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	RPS2	P15880	293 aa	Known RBP	13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SERPINA2	P20848	420 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	GABRA2	P47869	451 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	SERPINB10	P48595	397 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ERVK11-1	P61568	191 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	VBP1	P61758	197 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	BLMH	Q13867	455 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	DGUOK	Q16854	277 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	ELP2	Q6IA86	826 aa		13.19	□□□□□ -0.3
SH3TC1-223	ENST00000513495	USP43	Q70EL4	1123 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms