RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 EIF1P41567 113 aaKnown RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 AQP5P55064 265 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 COPZ1P61923 177 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 ZNF117Q03924 483 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 RAB40BQ12829 278 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 GANABQ14697 944 aaKnown RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 QPRTQ15274 297 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 TSC22D1Q15714 1073 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 TOMM34Q15785 309 aaPredicted RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 STK11Q15831 433 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 SYPL1Q16563 259 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 LRRC36Q1X8D7 754 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 HSP90B2PQ58FF3 399 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 XKR7Q5GH72 579 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 PVRIGQ6DKI7 326 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 SLC25A24Q6NUK1 477 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 CCDC80Q76M96 950 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 MTERF4Q7Z6M4 381 aaKnown RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 RIMKLAQ8IXN7 391 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 GPR137CQ8N3F9 429 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 ANKFN1Q8N957 763 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 OR52P1PQ8NH57 321 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 OR5W2Q8NH69 310 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 OR10D3Q8NH80 312 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 SFXN5Q8TD22 340 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 STARD4Q96DR4 205 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 ZHX1-C8orf76Q96EF9 292 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 VSIG2Q96IQ7 327 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 FCRL1Q96LA6 429 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 ATP6V1G3Q96LB4 118 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 TEX37Q96LM6 180 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 WFIKKN1Q96NZ8 548 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 OR52B2Q96RD2 323 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 STACQ99469 402 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 SORT1Q99523 831 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 SFXN3Q9BWM7 321 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 C1QTNF6Q9BXI9 259 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 POLR2J2Q9GZM3 115 aaKnown RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 POLR2J3Q9H1A7 115 aaKnown RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 ARMC7Q9H6L4 198 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 MEAF6Q9HAF1 191 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 PAQR5Q9NXK6 330 aaPredicted RBP3.09□□□□□ -1.91
HTT-210ENST00000512909 CCDC167Q9P0B6 97 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 Q9UF83 564 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 BTNL2Q9UIR0 455 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 USH1CQ9Y6N9 552 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 MGAQ8IWI9 3026 aa3.09□□□□□ -1.91
HTT-210ENST00000512909 ANKRD12Q6UB98 2062 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 CFAP47Q6ZTR5 3102 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 BAHCC1Q9P281 2608 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 FREM2Q5SZK8 3169 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 TMED7-TICAM2A0A0A6YYA0 188 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 IGHV7-81A0A0B4J1V7 117 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 IGHV2-70DA0A0C4DH43 119 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 A0A0G2JND7 137 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 LOC100653049A0A140TA62 436 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 A0A1W2PQD3 144 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 CLDN24A6NM45 220 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 K7EQM0 130 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 CLOCKO15516 846 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 EFNA2O43921 213 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 CTAG2O75638 210 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 KRT34O76011 436 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 C1QCP02747 245 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 BCHEP06276 602 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 CRHP06850 196 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 GKN3PP0CG01 181 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 CD99P14209 185 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 GTF2E2P29084 291 aaKnown RBP3.08□□□□□ -1.92
HTT-210ENST00000512909 IL12AP29459 219 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 CD79BP40259 229 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 CDKN2CP42773 168 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 MAGEA8P43361 318 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 DSTNP60981 165 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 HOXC5Q00444 222 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 ZNF45Q02386 682 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 FOXF1Q12946 379 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 SELPLGQ14242 412 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 ARL6IP1Q15041 203 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 MAPK14Q16539 360 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 AANATQ16613 207 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 PLPPR5Q32ZL2 321 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 C9orf135Q5VTT2 229 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 SAXO2Q658L1 398 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 EPGNQ6UW88 154 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 RNF165Q6ZSG1 346 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 PPP1R27Q86WC6 154 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 VRK2Q86Y07 508 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 C11orf53Q8IXP5 236 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 SLC35F2Q8IXU6 374 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 LRRC34Q8IZ02 419 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 GTPBP8Q8N3Z3 284 aaPredicted RBP3.08□□□□□ -1.92
HTT-210ENST00000512909 TMEM252Q8N6L7 170 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 OR8J2Q8NGG1 315 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 OR9I1Q8NGQ6 314 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 NANPQ8TBE9 248 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 RAB3IL1Q8TBN0 382 aa3.08□□□□□ -1.92
HTT-210ENST00000512909 RPL3LQ92901 407 aaKnown RBP3.08□□□□□ -1.92
HTT-210ENST00000512909 TESCQ96BS2 214 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms