RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 AKR7LQ8NHP1 331 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 ORAOV1Q8WV07 137 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 BAALCQ8WXS3 180 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 ING5Q8WYH8 240 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 TNFRSF14Q92956 283 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 SLC38A4Q969I6 547 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 SMARCD1Q96GM5 515 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 XPO6Q96QU8 1125 aaKnown RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 GPR21Q99679 349 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 HSPB9Q9BQS6 159 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 TMEM175Q9BSA9 504 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 MTG1Q9BT17 334 aaPredicted RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 NUP58Q9BVL2 599 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 MRPL20Q9BYC9 149 aaKnown RBP0.21□□□□□ -2.38
PDGFC-208ENST00000512711 SRRQ9GZT4 340 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 RHOFQ9HBH0 211 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 PXMP2Q9NR77 195 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 MCUBQ9NWR8 336 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF780BQ9Y6R6 833 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 HSPE1-MOB4S4R3N1 261 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 DLG5Q8TDM6 1919 aa0.21□□□□□ -2.38
PDGFC-208ENST00000512711 JCADQ9P266 1359 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 IGHV3-21A0A0B4J1V1 117 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 OR2AG2A6NM03 316 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 KNCNA6PVL3 124 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 PHGR1C9JFL3 82 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 C9JQL5 133 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 F5H5P2 479 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 TEX46H3BTG2 121 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 WBP4O75554 376 aaKnown RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 DHRS3O75911 302 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 OR2A4O95047 310 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 IFNW1P05000 195 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 OR4Q2P0C623 313 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 S100A2P29034 98 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 HMOX2P30519 316 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 PSMB2P49721 201 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 ATP5IP56385 69 aaPredicted RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 MTPNP58546 118 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 RAB11AP62491 216 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 RPL10AP62906 217 aaKnown RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 LAMTOR4Q0VGL1 99 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 PMVKQ15126 192 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 GABRA6Q16445 453 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 TNXAQ16473 311 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 ACSBG2Q5FVE4 666 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 TWF2Q6IBS0 349 aaKnown RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 NIPAL1Q6NVV3 410 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF773Q6PK81 442 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 FAM231DQ6ZW35 169 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 SCXQ7RTU7 201 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 LYZL2Q7Z4W2 148 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 SELENOHQ8IZQ5 122 aaKnown RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF555Q8NEP9 628 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 OR13C2Q8NGS9 318 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 RCN3Q96D15 328 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 UBE2E2Q96LR5 201 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 GSDMAQ96QA5 445 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 OR2A7Q96R45 310 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 OR52B2Q96RD2 323 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 MRPL32Q9BYC8 188 aaKnown RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 PKIBQ9C010 78 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 AICDAQ9GZX7 198 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 STMN4Q9H169 189 aaPredicted RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 CCNB1IP1Q9NPC3 277 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 TAS2R9Q9NYW1 312 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 OR5V1Q9UGF6 321 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 TAC3Q9UHF0 121 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 VAX2Q9UIW0 290 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 KLF13Q9Y2Y9 288 aaPredicted RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF706Q9Y5V0 76 aaPredicted RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 NPHP4O75161 1426 aaPredicted RBP0.2□□□□□ -2.38
PDGFC-208ENST00000512711 MICAL3Q7RTP6 2002 aa0.2□□□□□ -2.38
PDGFC-208ENST00000512711 TRAV8-4A0A0B4J246 113 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 A0A1W2PQL4 384 aaPredicted RBP0.19□□□□□ -2.38
PDGFC-208ENST00000512711 GMNCA6NCL1 334 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 C17orf98A8MV24 154 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 H0Y8G0 127 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 BCKDKO14874 412 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 ZBTB5O15062 677 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 NDUFS5O43920 106 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 MPDU1O75352 247 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 CIB2O75838 187 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 UPK1BO75841 260 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 P01737 135 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 GPX1P07203 203 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 RHOCP08134 193 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 SNRPAP09012 282 aaKnown RBP0.19□□□□□ -2.38
PDGFC-208ENST00000512711 OR12D1P0DN82 309 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 HOXB8P17481 243 aaPredicted RBP0.19□□□□□ -2.38
PDGFC-208ENST00000512711 PSMB9P28065 219 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 BLVRBP30043 206 aaPredicted RBP0.19□□□□□ -2.38
PDGFC-208ENST00000512711 SULT1E1P49888 294 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 RGS8P57771 180 aaPredicted RBP0.19□□□□□ -2.38
PDGFC-208ENST00000512711 PAFAH1B2P68402 229 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 ST3GAL4Q11206 333 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 MAJINQ3KP22 176 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 MLIPQ5VWP3 458 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 CENPQQ7L2Z9 268 aaPredicted RBP0.19□□□□□ -2.38
PDGFC-208ENST00000512711 NDUFAF7Q7L592 441 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms