RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 POLDIP2Q9Y2S7 368 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 PCDHGB1Q9Y5G3 927 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 KPTNQ9Y664 436 aa13.56□□□□□ -0.24
DDX41-213ENST00000512027 A0A0U1RQK1 487 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 A0A1W2PQ09 198 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 OR4C45A6NMZ5 311 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 HAX1O00165 279 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 NOS1APO75052 506 aaPredicted RBP13.55□□□□□ -0.24
DDX41-213ENST00000512027 GATBO75879 557 aaKnown RBP13.55□□□□□ -0.24
DDX41-213ENST00000512027 PRDX2P32119 198 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 CAV3P56539 151 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 ERVK11-1P61568 191 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 ACTA2P62736 377 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 ACTG2P63267 376 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 ALKBH1Q13686 389 aaKnown RBP13.55□□□□□ -0.24
DDX41-213ENST00000512027 C11orf91Q3C1V1 193 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 TMEM244Q5VVB8 128 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 KCTD20Q7Z5Y7 419 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 FAM185AQ8N0U4 392 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 PNKDQ8N490 385 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 CYGBQ8WWM9 190 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 GATAD2BQ8WXI9 593 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 ZDHHC16Q969W1 377 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 BORCS8Q96FH0 119 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 Q96MT0 163 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 PKIBQ9C010 78 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 HES4Q9HCC6 221 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 C19orf12Q9NSK7 152 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 IL36RNQ9UBH0 155 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 NBEAL1Q6ZS30 2694 aa13.55□□□□□ -0.24
DDX41-213ENST00000512027 RNASEK-C17orf49H0YIS7 233 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 GPR37O15354 613 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 FADS2O95864 444 aaKnown RBP13.54□□□□□ -0.24
DDX41-213ENST00000512027 RNASE1P07998 156 aaKnown RBP13.54□□□□□ -0.24
DDX41-213ENST00000512027 ZNF20P17024 532 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 POU3F4P49335 361 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 CCR9P51686 369 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 FUT6P51993 359 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 RAB40BQ12829 278 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 IL24Q13007 206 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 ZNF691Q5VV52 312 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 SLC25A26Q70HW3 274 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 PIP4P2Q8N4L2 257 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 KIR3DL3Q8N743 410 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 ZNF676Q8N7Q3 588 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 OR13C3Q8NGS6 347 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 RFT1Q96AA3 541 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 RDH12Q96NR8 316 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 SPACA5Q96QH8 159 aa13.54□□□□□ -0.24
DDX41-213ENST00000512027 RPL36Q9Y3U8 105 aaKnown RBP13.54□□□□□ -0.24
DDX41-213ENST00000512027 MEX3AA1L020 520 aaKnown RBP13.53□□□□□ -0.24
DDX41-213ENST00000512027 SPRY1O43609 319 aaPredicted RBP13.53□□□□□ -0.24
DDX41-213ENST00000512027 SERPINA3P01011 423 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 ISG15P05161 165 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 LIMS3P0CW19 117 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 LIMS4P0CW20 117 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 CALCBP10092 127 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 AZGP1P25311 298 aaKnown RBP13.53□□□□□ -0.24
DDX41-213ENST00000512027 CFPP27918 469 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 GTF2A1P52655 376 aaPredicted RBP13.53□□□□□ -0.24
DDX41-213ENST00000512027 CNN3Q15417 329 aaKnown RBP13.53□□□□□ -0.24
DDX41-213ENST00000512027 AWAT1Q58HT5 328 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 CMTM4Q8IZR5 234 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 SYS1Q8N2H4 156 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 CCDC54Q8NEL0 328 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 OR4M1Q8NGD0 313 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 OR13C9Q8NGT0 318 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 PP6455Q8WZ26 134 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 CEP19Q96LK0 163 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 PDCD1LG2Q9BQ51 273 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 MRPS18AQ9NVS2 196 aaKnown RBP13.53□□□□□ -0.24
DDX41-213ENST00000512027 HHLA2Q9UM44 414 aa13.53□□□□□ -0.24
DDX41-213ENST00000512027 DSCAML1Q8TD84 2053 aa13.52□□□□□ -0.24
DDX41-213ENST00000512027 SLC1A7O00341 560 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 MELTFP08582 738 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 ATF1P18846 271 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 NPBWR2P48146 333 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 COMPP49747 757 aaPredicted RBP13.52□□□□□ -0.25
DDX41-213ENST00000512027 ETV1P50549 477 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 SNU13P55769 128 aaKnown RBP13.52□□□□□ -0.25
DDX41-213ENST00000512027 COL10A1Q03692 680 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 XAF1Q6GPH4 301 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 Q6YL49 198 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 TNFRSF14Q92956 283 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 SLC25A28Q96A46 364 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 C10orf35Q96D05 121 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 PRDM13Q9H4Q3 707 aa13.52□□□□□ -0.25
DDX41-213ENST00000512027 RBFOX1Q9NWB1 397 aaKnown RBP13.52□□□□□ -0.25
DDX41-213ENST00000512027 ANGPTL7O43827 346 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 ZFPL1O95159 310 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 HKR1P10072 659 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 PIPP12273 146 aaPredicted RBP13.51□□□□□ -0.25
DDX41-213ENST00000512027 BCL3P20749 454 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 RBP2P50120 134 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 ATP1B3P54709 279 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 MTCP1P56278 107 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 BPIFB3P59826 476 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 ERVFRD-1P60508 538 aa13.51□□□□□ -0.25
DDX41-213ENST00000512027 ADARB1P78563 741 aaKnown RBP13.51□□□□□ -0.25
DDX41-213ENST00000512027 KLHL22Q53GT1 634 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms