RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FIP1L1Q6UN15 594 aaKnown RBP12.5□□□□□ -0.41
RNF4-210ENST00000508235 BTNL3Q6UXE8 466 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 SVOPQ8N4V2 548 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 UFD1Q92890 307 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 FAHD2AQ96GK7 314 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 OR5M11Q96RB7 305 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 BEX2Q9BXY8 128 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 RHOFQ9HBH0 211 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 HES4Q9HCC6 221 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 TMEM138Q9NPI0 162 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 SNTG1Q9NSN8 517 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 CTSZQ9UBR2 303 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 ZNF469Q96JG9 3925 aaPredicted RBP12.49□□□□□ -0.41
RNF4-210ENST00000508235 KIAA1324LA8MWY0 1029 aaPredicted RBP12.49□□□□□ -0.41
RNF4-210ENST00000508235 TRAPPC2LH3BP13 241 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 GPR37O15354 613 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 ECDO95905 644 aaPredicted RBP12.49□□□□□ -0.41
RNF4-210ENST00000508235 PLATP00750 562 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 ALDOBP05062 364 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 ZFP36P26651 326 aaKnown RBP12.49□□□□□ -0.41
RNF4-210ENST00000508235 POU3F4P49335 361 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 ERVK11-1P61568 191 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 RPS11P62280 158 aaKnown RBP eCLIP12.49□□□□□ -0.41
RNF4-210ENST00000508235 IL13RA1P78552 427 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 MLLT11Q13015 90 aaPredicted RBP12.49□□□□□ -0.41
RNF4-210ENST00000508235 PDZK1IP1Q13113 114 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 LRRC10Q5BKY1 277 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 ZNF529Q6P280 563 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 ZNF841Q6ZN19 808 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 SAXO1Q8IYX7 474 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 OR5T2Q8NGG2 359 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 ANGPTL6Q8NI99 470 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 CCL13Q99616 98 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 MRI1Q9BV20 369 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 TAS2R4Q9NYW5 299 aa12.49□□□□□ -0.41
RNF4-210ENST00000508235 LOC105371242A0A075B767 164 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 ZNF879B4DU55 563 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 DVL1O14640 695 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 ENSAO43768 121 aaKnown RBP12.48□□□□□ -0.41
RNF4-210ENST00000508235 GPX5O75715 221 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 KNG1P01042 644 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 HSMCR30P0CW71 290 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 PSG2P11465 335 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 FSTP19883 344 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 GABRA2P47869 451 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 TRAM1Q15629 374 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 KISS1Q15726 138 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 ZNF788Q6ZQV5 615 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 ZNF367Q7RTV3 350 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 ZNF561Q8N587 486 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 ZSCAN4Q8NAM6 433 aaPredicted RBP12.48□□□□□ -0.41
RNF4-210ENST00000508235 OR13C5Q8NGS8 318 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 RAB40AQ8WXH6 277 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 SLAMF9Q96A28 289 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 SEH1LQ96EE3 360 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 ZNF488Q96MN9 340 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 OR14A2Q96R54 314 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 GPER1Q99527 375 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 MTCH1Q9NZJ7 389 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 FOXJ3Q9UPW0 622 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 INSIG2Q9Y5U4 225 aa12.48□□□□□ -0.41
RNF4-210ENST00000508235 VPS13CQ709C8 3753 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 IGKV1D-17A0A075B6S4 117 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 TRBV5-7A0A0A0MS05 114 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 IGHV2-70DA0A0C4DH43 119 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 RFPL4AA6NLU0 287 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 RFPL4AL1F8VTS6 287 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 SIGLEC5O15389 551 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 LIPFP07098 398 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 TMEM225BP0DP42 221 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 PSMA1P25786 263 aaKnown RBP12.47□□□□□ -0.41
RNF4-210ENST00000508235 BDKRB2P30411 391 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 TGFBR2P37173 567 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 BMXP51813 675 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 TPBGQ13641 420 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 DOC2BQ14184 412 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 PNLDC1Q8NA58 520 aaKnown RBP12.47□□□□□ -0.41
RNF4-210ENST00000508235 ST8SIA4Q92187 359 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 RFT1Q96AA3 541 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 SDSLQ96GA7 329 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 DERL3Q96Q80 235 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 MGLLQ99685 303 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 C7orf69Q9H7B7 122 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 SMURF1Q9HCE7 757 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 GLS2Q9UI32 602 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 LRRC42Q9Y546 428 aa12.47□□□□□ -0.41
RNF4-210ENST00000508235 ARHGAP32A7KAX9 2087 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 SPRY1O43609 319 aaPredicted RBP12.46□□□□□ -0.41
RNF4-210ENST00000508235 FAM157CP0CG43 387 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 CPEP16870 476 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 IGFBP3P17936 291 aaPredicted RBP12.46□□□□□ -0.41
RNF4-210ENST00000508235 SRD5A1P18405 259 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 PRDX2P32119 198 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 SRP14P37108 136 aaKnown RBP12.46□□□□□ -0.41
RNF4-210ENST00000508235 MAP2K4P45985 399 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 CAV3P56539 151 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 SCGB2A2Q13296 93 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 IKZF1Q13422 519 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 SATL1Q86VE3 508 aa12.46□□□□□ -0.41
RNF4-210ENST00000508235 FAM58AQ8N1B3 248 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms