RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ING4Q9UNL4 249 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 V9GY05 133 aa16.87■□□□□ 0.29
USP53-203ENST00000507597 DYSFO75923 2080 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 IGHV2-70P01814 119 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 AVPI1Q5T686 147 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 DCDC5Q6ZRR9 648 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 NLRC3Q7RTR2 1065 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 ANKRD13BQ86YJ7 626 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 TGIF2LYQ8IUE0 185 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 OR5D18Q8NGL1 313 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 OR6M1Q8NGM8 313 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 SLAMF9Q96A28 289 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 NRIP2Q9BQI9 281 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 REG4Q9BYZ8 158 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 DNTTIP1Q9H147 329 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 NLKQ9UBE8 527 aa16.86■□□□□ 0.29
USP53-203ENST00000507597 POLQO75417 2590 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 C3orf80F5H4A9 247 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 SPRY1O43609 319 aaPredicted RBP16.85■□□□□ 0.29
USP53-203ENST00000507597 TMEM127O75204 238 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 KDM4BO94953 1096 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 ZP1P60852 638 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 LOXL1Q08397 574 aaPredicted RBP16.85■□□□□ 0.29
USP53-203ENST00000507597 ZNF404Q494X3 552 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 AWAT2Q6E213 333 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 SFRP4Q6FHJ7 346 aaPredicted RBP16.85■□□□□ 0.29
USP53-203ENST00000507597 ACP7Q6ZNF0 438 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 SLC36A1Q7Z2H8 476 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 CROCCP3Q8IVE0 287 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 FAM58AQ8N1B3 248 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 EMG1Q92979 244 aaKnown RBP16.85■□□□□ 0.29
USP53-203ENST00000507597 PPIL3Q9H2H8 161 aaKnown RBP16.85■□□□□ 0.29
USP53-203ENST00000507597 CNTD2Q9H8S5 307 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 TMEM165Q9HC07 324 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 IL36GQ9NZH8 169 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 MTCH1Q9NZJ7 389 aa16.85■□□□□ 0.29
USP53-203ENST00000507597 MRPS28Q9Y2Q9 187 aaKnown RBP16.85■□□□□ 0.29
USP53-203ENST00000507597 AK6Q9Y3D8 172 aaKnown RBP16.85■□□□□ 0.29
USP53-203ENST00000507597 NKX6-3A6NJ46 265 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 H3BUI4 141 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 KNG1P01042 644 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 HTR2CP28335 458 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 CD80P33681 288 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 ZMYND11Q15326 602 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 C1orf100Q5SVJ3 147 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 GPR107Q5VW38 600 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 ASCL4Q6XD76 172 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 SPNS3Q6ZMD2 512 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 DEFB108BQ8NET1 73 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 WFDC11Q8NEX6 87 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 TBC1D15Q8TC07 691 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 MRPS24Q96EL2 167 aaKnown RBP16.84■□□□□ 0.29
USP53-203ENST00000507597 MED30Q96HR3 178 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 BCL7BQ9BQE9 202 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 CST11Q9H112 138 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 NOTCH2Q04721 2471 aa16.84■□□□□ 0.29
USP53-203ENST00000507597 ANGPTL7O43827 346 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 OR3A4PP47883 348 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 GMFBP60983 142 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 ERVK11-1P61568 191 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 FAM189A2Q15884 450 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 SPIN3Q5JUX0 258 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 GLIPR1L1Q6UWM5 242 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 KRTAP1-3Q8IUG1 177 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 OR8B3Q8NGG8 313 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 OR8B2Q96RD0 313 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 TMEM246Q9BRR3 403 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 SEBOXQ9HB31 216 aaPredicted RBP16.83■□□□□ 0.28
USP53-203ENST00000507597 HES4Q9HCC6 221 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 TANC2Q9HCD6 1990 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 DCAF16Q9NXF7 216 aa16.83■□□□□ 0.28
USP53-203ENST00000507597 OR2AT4A6NND4 320 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 NOTOA8MTQ0 251 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 RNF223E7ERA6 249 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 SLC17A2O00624 439 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 ZNF205O95201 554 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 HTR3BO95264 441 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 BPNT1O95861 308 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 GTF2F2P13984 249 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 PRKACAP17612 351 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 ADRA2CP18825 462 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 BCL3P20749 454 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 NPY4RP50391 375 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 RAB11BQ15907 218 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 FAM201AQ5SY85 155 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 ELP2Q6IA86 826 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 PPP1R35Q8TAP8 253 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 RAB2BQ8WUD1 216 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 NEIL1Q96FI4 390 aaPredicted RBP16.82■□□□□ 0.28
USP53-203ENST00000507597 POM121Q96HA1 1249 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 CENPOQ9BU64 300 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 MRI1Q9BV20 369 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 ZNF665Q9H7R5 613 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 PATZ1Q9HBE1 687 aaKnown RBP16.82■□□□□ 0.28
USP53-203ENST00000507597 HMG20AQ9NP66 347 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 PDZD2O15018 2839 aa16.82■□□□□ 0.28
USP53-203ENST00000507597 CHD3Q12873 2000 aaKnown RBP16.81■□□□□ 0.28
USP53-203ENST00000507597 SH2D1BO14796 132 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 WNT9BO14905 357 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 CDRT1O95170 752 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms