RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 POC1AQ8NBT0 407 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 OR10Z1Q8NGY1 313 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 ZNF671Q8TAW3 534 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 TBC1D15Q8TC07 691 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 LGALS14Q8TCE9 139 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 CCL17Q92583 94 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 FAM3DQ96BQ1 224 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 SEH1LQ96EE3 360 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 CEP19Q96LK0 163 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 SLIRPQ9GZT3 109 aaKnown RBP11.94□□□□□ -0.5
RNF4-208ENST00000507247 LIN7BQ9HAP6 207 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 ELL3Q9HB65 397 aaPredicted RBP11.94□□□□□ -0.5
RNF4-208ENST00000507247 TMEM106BQ9NUM4 274 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 RBFOX1Q9NWB1 397 aaKnown RBP11.94□□□□□ -0.5
RNF4-208ENST00000507247 RNF7Q9UBF6 113 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 OR5V1Q9UGF6 321 aa11.94□□□□□ -0.5
RNF4-208ENST00000507247 FBN2P35556 2912 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 CENPEQ02224 2701 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 TMEM272A0A1B0GTI8 110 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 SRRM5B3KS81 715 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 TRAPPC2LH3BP13 241 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.93□□□□□ -0.5
RNF4-208ENST00000507247 LDLRAD4O15165 306 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 NOS1APO75052 506 aaPredicted RBP11.93□□□□□ -0.5
RNF4-208ENST00000507247 BPNT1O95861 308 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 CYB5AP00167 134 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 LHBP01229 141 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 ACAA1P09110 424 aaPredicted RBP11.93□□□□□ -0.5
RNF4-208ENST00000507247 VSIG8P0DPA2 414 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 CALCBP10092 127 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 DAOP14920 347 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 ARSBP15848 533 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 PAX1P15863 534 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 SERPINA2P20848 420 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 CD80P33681 288 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 PTH2RP49190 550 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 GMFBP60983 142 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 UNC119Q13432 240 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 RSU1Q15404 277 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 DGUOKQ16854 277 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 C2orf76Q3KRA6 126 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 SLC22A6Q4U2R8 563 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 BOLLQ8N9W6 283 aaKnown RBP11.93□□□□□ -0.5
RNF4-208ENST00000507247 TMEM104Q8NE00 496 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 C19orf18Q8NEA5 215 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 OR5H6Q8NGV6 325 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 OR11L1Q8NGX0 322 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 RDH5Q92781 318 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 NRIP2Q9BQI9 281 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 METTL9Q9H1A3 318 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 WDR13Q9H1Z4 485 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 HES4Q9HCC6 221 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 IL36GQ9NZH8 169 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 IL36RNQ9UBH0 155 aa11.93□□□□□ -0.5
RNF4-208ENST00000507247 TMEM14DPA8MWL7 114 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 TMEM178BH3BS89 294 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 ZNF205O95201 554 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 HTR3BO95264 441 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 UBBP0CG47 229 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 GLRA1P23415 457 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 SOX6P35712 828 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 MRPS11P82912 194 aaKnown RBP11.92□□□□□ -0.5
RNF4-208ENST00000507247 HFEQ30201 348 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 ELP2Q6IA86 826 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 ACP7Q6ZNF0 438 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 Q8NFD4 153 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 FAM46BQ96A09 425 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 LURAP1Q96LR2 239 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 S100A13Q99584 98 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 GSX2Q9BZM3 304 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 BANF2Q9H503 90 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 GHRLQ9UBU3 117 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 LRBAP50851 2863 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 CSMD1Q96PZ7 3565 aa11.92□□□□□ -0.5
RNF4-208ENST00000507247 NOTCH2Q04721 2471 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 NXPH2O95156 264 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 IRF2P14316 349 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 EFNB2P52799 333 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 ATP5J2P56134 94 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 METAP1DQ6UB28 335 aaPredicted RBP11.91□□□□□ -0.5
RNF4-208ENST00000507247 OR2W3Q7Z3T1 314 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 HPS1Q92902 700 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 EMG1Q92979 244 aaKnown RBP11.91□□□□□ -0.5
RNF4-208ENST00000507247 KCTD12Q96CX2 325 aaKnown RBP11.91□□□□□ -0.5
RNF4-208ENST00000507247 PERPQ96FX8 193 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 NXF2Q9GZY0 626 aaKnown RBP11.91□□□□□ -0.5
RNF4-208ENST00000507247 HMG20AQ9NP66 347 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 DLL4Q9NR61 685 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 ABRACLQ9P1F3 81 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 SPATA2Q9UM82 520 aa11.91□□□□□ -0.5
RNF4-208ENST00000507247 IGHV3OR15-7A0A075B7D8 119 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 LRRC30A6NM36 301 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 IFNL4K9M1U5 179 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 SSX4O60224 188 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 TMEM127O75204 238 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 ZNF780AO75290 641 aaPredicted RBP11.9□□□□□ -0.5
RNF4-208ENST00000507247 CRTAPO75718 401 aaPredicted RBP11.9□□□□□ -0.5
RNF4-208ENST00000507247 MPIG6BO95866 241 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 CSTBP04080 98 aaKnown RBP11.9□□□□□ -0.5
RNF4-208ENST00000507247 MGMTP16455 207 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms