RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ST3GAL4Q11206 333 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 MLLT11Q13015 90 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 PMS2P3Q13401 168 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 DYNC1I2Q13409 638 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 QPRTQ15274 297 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 SF3A2Q15428 464 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TRAM1Q15629 374 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CD226Q15762 336 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 NEDD8Q15843 81 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 NNATQ16517 81 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 DGUOKQ16854 277 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 PGGHGQ32M88 737 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF791Q3KP31 576 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC22A6Q4U2R8 563 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CLEC12AQ5QGZ9 265 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ATAD3CQ5T2N8 411 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 HES3Q5TGS1 186 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 AADACL4Q5VUY2 407 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 UBE2UQ5VVX9 321 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC22A10Q63ZE4 541 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF544Q6NX49 715 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 H3F3CQ6NXT2 135 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 C3orf33Q6P1S2 294 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 DNM1P34Q6PK57 102 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 NPSR1Q6W5P4 371 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 PP632Q6XCG6 107 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF620Q6ZNG0 422 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 SHISA6Q6ZSJ9 500 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 LANCL3Q6ZV70 420 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 AHSA2Q719I0 299 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 COX15Q7KZN9 410 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 NANOGNBQ7Z5D8 188 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 HMGN2P46Q86SG4 172 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 MARCH3Q86UD3 253 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 PLCZ1Q86YW0 608 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 NKAIN4Q8IVV8 208 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ACBD7Q8N6N7 88 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CD177Q8N6Q3 437 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR11G2Q8NGC1 345 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR4K17Q8NGC6 315 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR1J4Q8NGS1 313 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR13F1Q8NGS4 319 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2T4Q8NH00 348 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2T27Q8NH04 317 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR51A7Q8NH64 312 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 MFSD8Q8NHS3 518 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CNIH3Q8TBE1 160 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 GPR119Q8TDV5 335 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 AP3S1Q92572 193 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 THRSPQ92748 146 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TCEAL3Q969E4 200 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM45BQ96B21 275 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ZHX1-C8orf76Q96EF9 292 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ERMAPQ96PL5 475 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 MGLLQ99685 303 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM173AQ9BQD7 235 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 PRSS27Q9BQR3 290 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 UTP23Q9BRU9 249 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ANGPTL4Q9BY76 406 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 POTEKPQ9BYX7 375 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 OR52D1Q9H346 318 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 GPN2Q9H9Y4 310 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF160Q9HCG1 818 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 APMAPQ9HDC9 416 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 FGF20Q9NP95 211 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ISYNA1Q9NPH2 558 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ACOT13Q9NPJ3 140 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TIGARQ9NQ88 270 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CTPS2Q9NRF8 586 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 FKBP14Q9NWM8 211 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 HPF1Q9NWY4 346 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 PAQR5Q9NXK6 330 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 MRPL39Q9NYK5 338 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ERVK-18Q9QC07 812 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 MBD2Q9UBB5 411 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 CHRNA9Q9UGM1 479 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF223Q9UK11 482 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 BOKQ9UMX3 212 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 SSR3Q9UNL2 185 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 RNF6Q9Y252 685 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 SIGLEC7Q9Y286 467 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TRAPPC4Q9Y296 219 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 GSTK1Q9Y2Q3 226 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 EXOSC1Q9Y3B2 195 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 HDGFL3Q9Y3E1 203 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM14AQ9Y6G1 99 aa1.9□□□□□ -2.11
TOPBP1-205ENST00000506779 MAST4O15021 2626 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 FLNBO75369 2602 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SETXQ7Z333 2677 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 MYO7AQ13402 2215 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CHD6Q8TD26 2715 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 TMED7-TICAM2A0A0A6YYA0 188 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 IGHV3-35A0A0C4DH35 117 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR6C65A6NJZ3 312 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF726A6NNF4 738 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF670-ZNF695F2Z2N8 137 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 KLRC4-KLRK1H3BQV0 150 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 H3BSA7 217 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 KPNA4O00629 521 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 BHLHE40O14503 412 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms