RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SLC31A1O15431 190 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 HMMRO75330 724 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 CATP04040 527 aaKnown RBP0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 COILP38432 576 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 MAGEA1P43355 309 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 TRDNQ13061 729 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 CLEC18BQ6UXF7 455 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 ZFP82Q8N141 532 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 LINC00337Q8N6G1 96 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 ZNF555Q8NEP9 628 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 CCDC148Q8NFR7 591 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 OR5H2Q8NGV7 314 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 OR8B2Q96RD0 313 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 BPIFA3Q9BQP9 254 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 MTG1Q9BT17 334 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 THTPAQ9BU02 230 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 IQCGQ9H095 443 aaKnown RBP0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 DEFB129Q9H1M3 183 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 TXNIPQ9H3M7 391 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 VPS37BQ9H9H4 285 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 ZC4H2Q9NQZ6 224 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 U3KQK5 164 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 MROH5Q6ZUA9 1318 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 DOCK10Q96BY6 2186 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 PLXNA3P51805 1871 aa0.8□□□□□ -2.28
HMGB1P29-201ENST00000505659 ADGRB3O60242 1522 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 LAMB2P55268 1798 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 TRAV25A0A0B4J276 109 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 MPDU1O75352 247 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 HSBP1O75506 76 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 UPK1BO75841 260 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 TPM2P07951 284 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 OR4Q2P0C623 313 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 UBCP0CG48 685 aaKnown RBP0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 GALP22466 123 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 PAX6P26367 422 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 YWHAEP62258 255 aaKnown RBP0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 RPL18AQ02543 176 aaKnown RBP0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 DNAJC3Q13217 504 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 ELOCQ15369 112 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 C5orf64Q2M2E5 130 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 FBXL19-AS1Q494R0 122 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 NDUFAF7Q7L592 441 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 DAW1Q8N136 415 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 COMMD1Q8N668 190 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 DNAAF3Q8N9W5 541 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 BBOF1Q8ND07 529 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 BPIFB6Q8NFQ5 453 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 OR10Z1Q8NGY1 313 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 LMX1AQ8TE12 382 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 TTTY12Q9BZ98 90 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 TUBA4BQ9H853 241 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 LYRM4Q9HD34 91 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 MRPL22Q9NWU5 206 aaKnown RBP0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 TBC1D24Q9ULP9 559 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 GBF1Q92538 1859 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 RP1L1Q8IWN7 2480 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 PLEKHG2Q9H7P9 1386 aa0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 NPHP4O75161 1426 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P29-201ENST00000505659 ADAMTSL3P82987 1691 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 IGKV1D-37A0A075B6S9 117 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 LRRIQ4A6NIV6 560 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 H3BMM0 161 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 PTTG1O95997 202 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 CGB3P0DN86 165 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 CGB7P0DN87 165 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 PTHLHP12272 177 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 GZMAP12544 262 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 GPR1P46091 355 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 NUDT2P50583 147 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 ZNF140P52738 457 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 TMEM241Q24JQ0 296 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 Q6ZRU5 148 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 FAM122BQ7Z309 247 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 SLC7A5P1Q8MH63 180 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 KIF2BQ8N4N8 673 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 C3orf22Q8N5N4 141 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 INO80EQ8NBZ0 244 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 APOBEC3DQ96AK3 386 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 UBE2WQ96B02 151 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 TXNDC17Q9BRA2 123 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 GABARAPL1Q9H0R8 117 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 OR51B5Q9H339 312 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 ADA2Q9NZK5 511 aa0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 KLF13Q9Y2Y9 288 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P29-201ENST00000505659 IGHV3-21A0A0B4J1V1 117 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 SERTM2A0A1B0GWG4 89 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 SLC22A20A6NK97 555 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 C9JQL5 133 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 H3BN98 237 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 GOLGA8TH3BQL2 631 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 J3QT63 122 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 K7ERS5 55 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 RGS5O15539 181 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 NDUFS5O43920 106 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 DNAJB6O75190 326 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 DHRS3O75911 302 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 S1PR2O95136 353 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 SMC2O95347 1197 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms