RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 RBX1P62877 108 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 RPL10AP62906 217 aaKnown RBP2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 PRR9Q5T870 116 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 ITPRIPQ8IWB1 547 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 SGPP2Q8IWX5 399 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 ST13P4Q8IZP2 240 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 CLHC1Q8NHS4 586 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZNF420Q8TAQ5 688 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 NT5CQ8TCD5 201 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 CATSPER2Q96P56 530 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 OR2M4Q96R27 311 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 C20orf144Q9BQM9 153 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 TMED9Q9BVK6 235 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 SPZ1Q9BXG8 430 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 MAP1LC3CQ9BXW4 147 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 NSRP1Q9H0G5 558 aaKnown RBP2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 RAB1BQ9H0U4 201 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 SLC38A1Q9H2H9 487 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 PLEKHF2Q9H8W4 249 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 CHMP5Q9NZZ3 219 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 MARCOQ9UEW3 520 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 SLC7A11Q9UPY5 501 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 WIF1Q9Y5W5 379 aa2.74□□□□□ -1.97
TRAPPC13-205ENST00000504243 C2orf16Q68DN1 1984 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 RAB19A4D1S5 217 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 F8VZ95 297 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 NDUFS6O75380 124 aaKnown RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 DHRS3O75911 302 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 CDK1P06493 297 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 NELFEP18615 380 aaKnown RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 S100A5P33763 92 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 MPIP34949 423 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 HTR2BP41595 481 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 ELF3P78545 371 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 PRKCDQ05655 676 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 MAD2L1BPQ15013 274 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 C18orf21Q32NC0 220 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 CDNFQ49AH0 187 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 C8orf74Q6P047 294 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 COPS6Q7L5N1 327 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 PID1Q7Z2X4 250 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 RBM45Q8IUH3 476 aaKnown RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 CCNYL1Q8N7R7 359 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 CCDC12Q8WUD4 166 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 PDCD6IPQ8WUM4 868 aaKnown RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 SMARCD1Q96GM5 515 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 METTL26Q96S19 204 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 CTRCQ99895 268 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 ACBD6Q9BR61 282 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 COPS4Q9BT78 406 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 API5Q9BZZ5 524 aaKnown RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 PORCNQ9H237 461 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 VCX3BQ9H321 246 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 SDHAF2Q9NX18 166 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 CD300AQ9UGN4 299 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 ZNF229Q9UJW7 825 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 POFUT2Q9Y2G5 429 aa2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 BRD4O60885 1362 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC13-205ENST00000504243 BAZ2AQ9UIF9 1905 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 TMEM72A0PK05 275 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 E7EWF7 191 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 K7EN84 100 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 TCAPO15273 167 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 GATCO43716 136 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 CRTAPO75718 401 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 LHBP01229 141 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 CD5P06127 495 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 CELP19835 753 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 TGFBR1P36897 503 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 IDH2P48735 452 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 TPM4P67936 248 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 NOTCH2Q04721 2471 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 ATP5G2Q06055 141 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 DYNC1I2Q13409 638 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 COTL1Q14019 142 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 ANGPT1Q15389 498 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 SYT6Q5T7P8 510 aaPredicted RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 SPINT4Q6UDR6 99 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 DAZ4Q86SG3 579 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 LRRC8AQ8IWT6 810 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 CA13Q8N1Q1 262 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 LYPD1Q8N2G4 141 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 ATPAF2Q8N5M1 289 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 ORAOV1Q8WV07 137 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 C22orf15Q8WYQ4 148 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 CDKL2Q92772 493 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 SMIM8Q96KF7 97 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 GLT1D1Q96MS3 346 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 DERL3Q96Q80 235 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 OR52A5Q9H2C5 316 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 DHX35Q9H5Z1 703 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 DAZ1Q9NQZ3 744 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 CA10Q9NS85 328 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 IL37Q9NZH6 218 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 STX18Q9P2W9 335 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 DHCR7Q9UBM7 475 aaKnown RBP2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
TRAPPC13-205ENST00000504243 AP3M1Q9Y2T2 418 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms