RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, human

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-217	ENST00000498722	PURG	Q9UJV8	347 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-217	ENST00000498722	hCG_38984	A0A1B0GV85	526 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722		A0A1W2PQ09	198 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	LYNX1	G3V0Z9	82 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	BPNT1	O95861	308 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	HPX	P02790	462 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	LYNX1	P0DP58	116 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	RAC2	P15153	192 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	FOSL1	P15407	271 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	RAB6A	P20340	208 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	MMP15	P51511	669 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	PRSS12	P56730	875 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	MRPS10	P82664	201 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	MADCAM1	Q13477	382 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	TMEM69	Q5SWH9	247 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	OR2T2	Q6IF00	324 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	DNM1P46	Q6ZS02	220 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	MRPL21	Q7Z2W9	205 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	BHLHE23	Q8NDY6	225 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	OR2AE1	Q8NHA4	323 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	C10orf105	Q8TEF2	133 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	RFT1	Q96AA3	541 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	CNTD2	Q9H8S5	307 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	DLL4	Q9NR61	685 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722	ZAN	Q9Y493	2812 aa		13.71	□□□□□ -0.21
LMNA-217	ENST00000498722		A0A0A6YYH2	397 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	TMEM272	A0A1B0GTI8	110 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722		A6NJ64	397 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	ZSCAN5B	A6NJL1	495 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	GSTZ1	O43708	216 aa	Predicted RBP	13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	CDC14B	O60729	498 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	IGHV1-46	P01743	117 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	UBB	P0CG47	229 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	SLC25A16	P16260	332 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	FAH	P16930	419 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	KITLG	P21583	273 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	GSK3A	P49840	483 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	FAM3A	P98173	230 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	ASAH1	Q13510	395 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	OR8B8	Q15620	311 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	FAM189A2	Q15884	450 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	FBXW12	Q6X9E4	464 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	OR2Z1	Q8NG97	314 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	SPSB1	Q96BD6	273 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	GPER1	Q99527	375 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	SMR3A	Q99954	134 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	SAP30L	Q9HAJ7	183 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	RAB22A	Q9UL26	194 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	ZDHHC8	Q9ULC8	765 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	RHBDD3	Q9Y3P4	386 aa		13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.7	□□□□□ -0.22
LMNA-217	ENST00000498722	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722		A0A1B0GVG6	124 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	NDUFS8	O00217	210 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	XRCC3	O43542	346 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	SCGN	O76038	276 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	PRKACB	P22694	351 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	TNFSF4	P23510	183 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	CDK2	P24941	298 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	ZNF92	Q03936	586 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	GK2	Q14410	553 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	CLVS2	Q5SYC1	327 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	AWAT2	Q6E213	333 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	MZT2B	Q6NZ67	158 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	OR2W3	Q7Z3T1	314 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	OR4D6	Q8NGJ1	314 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	RDH5	Q92781	318 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	ABHD1	Q96SE0	405 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	THAP7	Q9BT49	309 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	EGLN1	Q9GZT9	426 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	GHRL	Q9UBU3	117 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	FBLN5	Q9UBX5	448 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	TBC1D24	Q9ULP9	559 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	MRPS7	Q9Y2R9	242 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	TLN2	Q9Y4G6	2542 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	ABCA1	O95477	2261 aa		13.69	□□□□□ -0.22
LMNA-217	ENST00000498722	METTL21EP	A6NDL7	271 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	LDLRAD4	O15165	306 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	SELE	P16581	610 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	TNFAIP6	P98066	277 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	ZNF57	Q68EA5	555 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	TMEM42	Q69YG0	159 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	BIVM	Q86UB2	503 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	ANGPTL5	Q86XS5	388 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	DTX3	Q8N9I9	347 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	CSNK2A3	Q8NEV1	391 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	ELMOD3	Q96FG2	381 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	DIRC2	Q96SL1	478 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	REPIN1	Q9BWE0	567 aa	Known RBP	13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	SLC22A4	Q9H015	551 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	ATG5	Q9H1Y0	275 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	GSX1	Q9H4S2	264 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	NKIRAS2	Q9NYR9	191 aa		13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.68	□□□□□ -0.22
LMNA-217	ENST00000498722	IGKV1-9	A0A0C4DH69	117 aa		13.67	□□□□□ -0.22
LMNA-217	ENST00000498722	GGT3P	A6NGU5	568 aa		13.67	□□□□□ -0.22
LMNA-217	ENST00000498722	GABARAP	H6UMI1	98 aa		13.67	□□□□□ -0.22
LMNA-217	ENST00000498722	NRAS	P01111	189 aa		13.67	□□□□□ -0.22
LMNA-217	ENST00000498722	COL8A2	P25067	703 aa		13.67	□□□□□ -0.22
LMNA-217	ENST00000498722	ACKR3	P25106	362 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms