RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	ABCG5	Q9H222	651 aa		4.56	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OPA3	Q9H6K4	179 aa		4.56	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PPP1R3E	Q9H7J1	279 aa		4.56	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OBP2B	Q9NPH6	170 aa		4.56	□□□□□ -1.68
HMGXB4-208	ENST00000498325	B3GNT2	Q9NY97	397 aa		4.56	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF319	Q9P2F9	582 aa		4.56	□□□□□ -1.68
HMGXB4-208	ENST00000498325	EIF3K	Q9UBQ5	218 aa	Known RBP	4.56	□□□□□ -1.68
HMGXB4-208	ENST00000498325	POU2F3	Q9UKI9	436 aa		4.56	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RTTN	Q86VV8	2226 aa		4.56	□□□□□ -1.68
HMGXB4-208	ENST00000498325		A0A0A6YYH2	397 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C5orf49	A4QMS7	147 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	METTL21EP	A6NDL7	271 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	HMX3	A6NHT5	357 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325		A6NJ64	397 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CTDSPL	O15194	276 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNHIT1	O43257	154 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LMX1B	O60663	402 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SCGN	O76038	276 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CSF3	P09919	207 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	UBB	P0CG47	229 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	IL7	P13232	177 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ARSB	P15848	533 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CBR1	P16152	277 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PRKACB	P22694	351 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	IGHV1-2	P23083	117 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	AZGP1	P25311	298 aa	Known RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CEACAM8	P31997	349 aa	Predicted RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OPRM1	P35372	400 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF93	P35789	620 aa	Predicted RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MNDA	P41218	407 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TDGF1P3	P51864	188 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PTTG1IP	P53801	180 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CLDN12	P56749	244 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	IFITM2	Q01629	132 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CD300C	Q08708	224 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CDK10	Q15131	360 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CNN3	Q15417	329 aa	Known RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF79	Q15937	498 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GABRA6	Q16445	453 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	BAK1	Q16611	211 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SNAI3	Q3KNW1	292 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZFP69	Q49AA0	526 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	HIKESHI	Q53FT3	197 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TMEM211	Q6ICI0	200 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FAM166A	Q6J272	317 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MZT2B	Q6NZ67	158 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF529	Q6P280	563 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	VWA1	Q6PCB0	445 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GFRAL	Q6UXV0	394 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	COLCA1	Q6ZS62	124 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	BIVM	Q86UB2	503 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LIX1L	Q8IVB5	337 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SLC7A5P1	Q8MH63	180 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C17orf78	Q8N4C9	275 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FTMT	Q8N4E7	242 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF610	Q8N9Z0	462 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CPEB3	Q8NE35	698 aa	Known RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CSNK2A3	Q8NEV1	391 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SLC30A7	Q8NEW0	376 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SPSB4	Q96A44	273 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SLC25A28	Q96A46	364 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PTX4	Q96A99	478 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	HAVCR1	Q96D42	359 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	STARD4	Q96DR4	205 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MED30	Q96HR3	178 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	POM121L2	Q96KW2	1035 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LYZL4	Q96KX0	146 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	S100A13	Q99584	98 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SDHC	Q99643	169 aa	Predicted RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FOXC2	Q99958	501 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	THAP7	Q9BT49	309 aa	Predicted RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SFXN3	Q9BWM7	321 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GON7	Q9BXV9	100 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PIGM	Q9H3S5	423 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	METTL17	Q9H7H0	456 aa	Predicted RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CDH20	Q9HBT6	801 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PCDHB16	Q9NRJ7	776 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C14orf119	Q9NWQ9	140 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF224	Q9NZL3	707 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GHRL	Q9UBU3	117 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR5V1	Q9UGF6	321 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RAB22A	Q9UL26	194 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SLC7A11	Q9UPY5	501 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PIGL	Q9Y2B2	252 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MRPS7	Q9Y2R9	242 aa	Known RBP	4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	AMDHD2	Q9Y303	409 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	VPS13C	Q709C8	3753 aa		4.55	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ARHGAP21	Q5T5U3	1957 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LOC100509620	A0A075B734	347 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325		A0A0B4J203	849 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325		A0A0G2JMP0	313 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325		A0A0X1KG70	313 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GGT3P	A6NGU5	568 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325		A6NIN4	97 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325		E9PLN8	166 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GABARAP	H6UMI1	98 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	XRCC3	O43542	346 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GSTZ1	O43708	216 aa	Predicted RBP	4.54	□□□□□ -1.68

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