RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CELP19835 753 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 GPM6AP51674 278 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 GMFBP60983 142 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 GNG3P63215 75 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 ACSM1Q08AH1 577 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 CEP78Q5JTW2 689 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 CLVS2Q5SYC1 327 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 C12orf54Q6X4T0 127 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 Q6ZSR3 168 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 MOB3CQ70IA8 216 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 KRT74Q7RTS7 529 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 GPR148Q8TDV2 347 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 HPSE2Q8WWQ2 592 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 ST8SIA4Q92187 359 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 GCDHQ92947 438 aaPredicted RBP12.72□□□□□ -0.37
NUP50-219ENST00000497960 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 CCL13Q99616 98 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 SMURF1Q9HCE7 757 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 ACOT13Q9NPJ3 140 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 ZNF281Q9Y2X9 895 aa12.72□□□□□ -0.37
NUP50-219ENST00000497960 OR5B21A6NL26 309 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 ZNF879B4DU55 563 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 ZNF732B4DXR9 585 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 HAX1O00165 279 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 NRASP01111 189 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 EMX1Q04741 257 aaPredicted RBP12.71□□□□□ -0.37
NUP50-219ENST00000497960 MLLT11Q13015 90 aaPredicted RBP12.71□□□□□ -0.37
NUP50-219ENST00000497960 CEACAM21Q3KPI0 293 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 GPR157Q5UAW9 335 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 BTN2A1Q7KYR7 527 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 SPARTQ8N0X7 666 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 BCL6BQ8N143 479 aaPredicted RBP12.71□□□□□ -0.37
NUP50-219ENST00000497960 ZDHHC22Q8N966 263 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 OR5A2Q8NGI9 324 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 OR13C5Q8NGS8 318 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 ZNF671Q8TAW3 534 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 RGP1Q92546 391 aaPredicted RBP12.71□□□□□ -0.37
NUP50-219ENST00000497960 FCGR1BQ92637 280 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 GHSRQ92847 366 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 C10orf35Q96D05 121 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 PCGF1Q9BSM1 259 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 ESM1Q9NQ30 184 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 GPR173Q9NS66 373 aa12.71□□□□□ -0.37
NUP50-219ENST00000497960 ANKRD61A6NGH8 418 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 NKX6-3A6NJ46 265 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.7□□□□□ -0.38
NUP50-219ENST00000497960 AKR7A2O43488 359 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 NDUFB3O43676 98 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 GATBO75879 557 aaKnown RBP12.7□□□□□ -0.38
NUP50-219ENST00000497960 PLATP00750 562 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 CD2P06729 351 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 OCM2P0CE71 109 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 PSMB9P28065 219 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 SOX2P48431 317 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 UBA52P62987 128 aaKnown RBP12.7□□□□□ -0.38
NUP50-219ENST00000497960 BAMBIQ13145 260 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 CNN3Q15417 329 aaKnown RBP12.7□□□□□ -0.38
NUP50-219ENST00000497960 YIF1BQ5BJH7 314 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 METTL11BQ5VVY1 283 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 C9orf139Q6ZV77 190 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 OR5T2Q8NGG2 359 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 NPRL2Q8WTW4 380 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 PP6455Q8WZ26 134 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 FGGYQ96C11 551 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 SEH1LQ96EE3 360 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 ADAT3Q96EY9 351 aaPredicted RBP12.7□□□□□ -0.38
NUP50-219ENST00000497960 OPALINQ96PE5 141 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 MGLLQ99685 303 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 TMED9Q9BVK6 235 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 CHST5Q9GZS9 411 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 FGF23Q9GZV9 251 aaPredicted RBP12.7□□□□□ -0.38
NUP50-219ENST00000497960 DNTTIP1Q9H147 329 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 OR51I2Q9H344 312 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 ZNF696Q9H7X3 374 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 ISYNA1Q9NPH2 558 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 SNTG1Q9NSN8 517 aa12.7□□□□□ -0.38
NUP50-219ENST00000497960 A0A087WXM4 84 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 GPR37O15354 613 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 TOX4O94842 621 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 SERPINA3P01011 423 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 CD1AP06126 327 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 OCMP0CE72 109 aaPredicted RBP12.69□□□□□ -0.38
NUP50-219ENST00000497960 GLRA1P23415 457 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 BPIFB3P59826 476 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 IKZF1Q13422 519 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 TUSC1Q2TAM9 212 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 LRRC10Q5BKY1 277 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 DMRTC1Q5HYR2 192 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 ATPAF1Q5TC12 328 aaPredicted RBP12.69□□□□□ -0.38
NUP50-219ENST00000497960 STUMQ69YW2 141 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 FAM216BQ8N7L0 139 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 TSPAN14Q8NG11 270 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 TMEM106AQ96A25 262 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 MED30Q96HR3 178 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 NR1H4Q96RI1 486 aaPredicted RBP12.69□□□□□ -0.38
NUP50-219ENST00000497960 WDR13Q9H1Z4 485 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 ZMAT3Q9HA38 289 aaKnown RBP12.69□□□□□ -0.38
NUP50-219ENST00000497960 VCX3AQ9NNX9 186 aa12.69□□□□□ -0.38
NUP50-219ENST00000497960 TMEM89A2RUT3 159 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms