RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SCN2BO60939 215 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 MPDU1O75352 247 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 SCELO95171 688 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 IFNA14P01570 189 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 SYT1P21579 422 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 CFL1P23528 166 aaKnown RBP2.51□□□□□ -2.01
VPS36-206ENST00000497149 PSMB5P28074 263 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 P2RY2P41231 377 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 ACTR1BP42025 376 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 TUFMP49411 452 aaKnown RBP2.51□□□□□ -2.01
VPS36-206ENST00000497149 SERPINB9P50453 376 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 UBE2E1P51965 193 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 OR2B8PP59922 312 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 FUT5Q11128 374 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 ALX1Q15699 326 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 TSC22D1Q15714 1073 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 CDKL4Q5MAI5 379 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 TMPRSS11AQ6ZMR5 421 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 USP50Q70EL3 339 aaPredicted RBP2.51□□□□□ -2.01
VPS36-206ENST00000497149 PID1Q7Z2X4 250 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 PAGE2Q7Z2X7 111 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 RAB43Q86YS6 212 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 C10orf67Q8IYJ2 551 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 CMTM8Q8IZV2 173 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 KIF2BQ8N4N8 673 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 APCDD1LQ8NCL9 501 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 OR1L1Q8NH94 360 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 DCAKDQ8WVC6 231 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 DYDC1Q8WWB3 177 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 PIH1D2Q8WWB5 315 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 GTF2H4Q92759 462 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 RCN3Q96D15 328 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 ZNF514Q96K75 400 aaPredicted RBP2.51□□□□□ -2.01
VPS36-206ENST00000497149 SCGB3A2Q96PL1 93 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 CSPG4P5Q96PW8 444 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 PRRG3Q9BZD7 231 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 SRRQ9GZT4 340 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 ZSCAN16Q9H4T2 348 aaPredicted RBP2.51□□□□□ -2.01
VPS36-206ENST00000497149 OR2S2Q9NQN1 319 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 BATF3Q9NR55 127 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 TREX1Q9NSU2 369 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 RBFOX1Q9NWB1 397 aaKnown RBP2.51□□□□□ -2.01
VPS36-206ENST00000497149 ZNF257Q9Y2Q1 563 aa2.51□□□□□ -2.01
VPS36-206ENST00000497149 ELP1O95163 1332 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 SCN4AP35499 1836 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 A0A0A6YYD5 115 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 TMEM213A2RRL7 107 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 FABP12A6NFH5 140 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 LRRN3E7EW58 273 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 RNASEK-C17orf49H0YIS7 233 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 MANBAO00462 879 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 GATCO43716 136 aaKnown RBP2.5□□□□□ -2.01
VPS36-206ENST00000497149 CTNSO60931 367 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 NDUFS6O75380 124 aaKnown RBP2.5□□□□□ -2.01
VPS36-206ENST00000497149 HSBP1O75506 76 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 GATBO75879 557 aaKnown RBP2.5□□□□□ -2.01
VPS36-206ENST00000497149 FARS2O95363 451 aaKnown RBP2.5□□□□□ -2.01
VPS36-206ENST00000497149 DEXIO95424 95 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 ETHE1O95571 254 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 TRBV12-3P01733 135 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 HMGN1P05114 100 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 IDO1P14902 403 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 TGM4P49221 684 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 AP3S2P59780 193 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 STX3Q13277 289 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 NAB1Q13506 487 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 TMED2Q15363 201 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 C5orf64Q2M2E5 130 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 GOLGA7BQ2TAP0 167 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 CLEC18BQ6UXF7 455 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 DRAM1Q8N682 238 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 FBXO36Q8NEA4 188 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 ZNF680Q8NEM1 530 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 PHOSPHO2Q8TCD6 241 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 TMEM239Q8WW34 195 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 CPNE4Q96A23 557 aaPredicted RBP2.5□□□□□ -2.01
VPS36-206ENST00000497149 IP6K3Q96PC2 410 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 DCUN1D5Q9BTE7 237 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 NUDT9Q9BW91 350 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 POTEKPQ9BYX7 375 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 NAA50Q9GZZ1 169 aaKnown RBP2.5□□□□□ -2.01
VPS36-206ENST00000497149 VCX3AQ9NNX9 186 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 PRSS16Q9NQE7 514 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 FARSAQ9Y285 508 aaKnown RBP2.5□□□□□ -2.01
VPS36-206ENST00000497149 KPTNQ9Y664 436 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 PLB1Q6P1J6 1458 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 AK9Q5TCS8 1911 aa2.5□□□□□ -2.01
VPS36-206ENST00000497149 TICRRQ7Z2Z1 1910 aa2.49□□□□□ -2.01
VPS36-206ENST00000497149 ZNF99A8MXY4 864 aaPredicted RBP2.49□□□□□ -2.01
VPS36-206ENST00000497149 PRAMEF26H0Y7S4 382 aa2.49□□□□□ -2.01
VPS36-206ENST00000497149 M0R1X1 148 aa2.49□□□□□ -2.01
VPS36-206ENST00000497149 PGRMC1O00264 195 aaKnown RBP2.49□□□□□ -2.01
VPS36-206ENST00000497149 TOX3O15405 576 aaPredicted RBP2.49□□□□□ -2.01
VPS36-206ENST00000497149 CST4P01036 141 aa2.49□□□□□ -2.01
VPS36-206ENST00000497149 IGLV2-8P01709 118 aa2.49□□□□□ -2.01
VPS36-206ENST00000497149 CATP04040 527 aaKnown RBP2.49□□□□□ -2.01
VPS36-206ENST00000497149 OR4E1P0C645 316 aa2.49□□□□□ -2.01
VPS36-206ENST00000497149 SLC35E2BP0CK96 405 aa2.49□□□□□ -2.01
VPS36-206ENST00000497149 HSPD1P10809 573 aaKnown RBP2.49□□□□□ -2.01
VPS36-206ENST00000497149 GFAPP14136 432 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms