RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 MRPL41Q8IXM3 137 aaKnown RBP5.42□□□□□ -1.54
SSBP1-213ENST00000496622 ARIH2OSQ8N7S6 290 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 HSD17B11Q8NBQ5 300 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 OR51A4Q8NGJ6 313 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 SCMH1Q96GD3 660 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 ALKBH7Q9BT30 221 aaPredicted RBP5.42□□□□□ -1.54
SSBP1-213ENST00000496622 RHOFQ9HBH0 211 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 SPTA1P02549 2419 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 PINLYPA6NC86 204 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 GPR31O00270 319 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 PLPP3O14495 311 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 XKRYO14609 159 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 MBPP02686 304 aaPredicted RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 NMBP08949 121 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF883P0CG24 379 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 SLC2A2P11168 524 aaPredicted RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 S100A2P29034 98 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 TNFSF8P32971 234 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 CD80P33681 288 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 PDZK1IP1Q13113 114 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM249Q2WGJ8 235 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 NHLRC3Q5JS37 347 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 RAET1LQ5VY80 246 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 GLB1L2Q8IW92 636 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 SLC35F2Q8IXU6 374 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 OR4K17Q8NGC6 315 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 OR52N4Q8NGI2 321 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 OR10AC1Q8NH08 325 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 OR4K15Q8NH41 348 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 ASB5Q8WWX0 329 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 PSMF1Q92530 271 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 SPSB1Q96BD6 273 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 PGLYRP3Q96LB9 341 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 KCTD7Q96MP8 289 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 NOL4LQ96MY1 436 aaPredicted RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 FAM110AQ9BQ89 295 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 NMNAT2Q9BZQ4 307 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 STRADBQ9C0K7 418 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 RNF121Q9H920 327 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 B3GAT2Q9NPZ5 323 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 DEPPQ9NTK1 212 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 PLEKHB1Q9UF11 243 aaPredicted RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 NXT1Q9UKK6 140 aaKnown RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 IKZF2Q9UKS7 526 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 GSTK1Q9Y2Q3 226 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 COA3Q9Y2R0 106 aaPredicted RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 NBASA2RRP1 2371 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 DOCK10Q96BY6 2186 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 ANKUB1A6NFN9 424 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 AP4M1O00189 453 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 ANOS1P23352 680 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 GABRA5P31644 462 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 CDAP32320 146 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 SOX2P48431 317 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 CLDN20P56880 219 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 KLF3P57682 345 aaPredicted RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 SGCBQ16585 318 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 GUCA2BQ16661 112 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 ZSWIM7Q19AV6 140 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 TIMM50Q3ZCQ8 353 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 PHYHD1Q5SRE7 291 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 DNLZQ5SXM8 178 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 SFRP5Q5T4F7 317 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 TMPRSS11AQ6ZMR5 421 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 CEACAM19Q7Z692 300 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 LYG1Q8N1E2 194 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 BEST3Q8N1M1 668 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 EXD3Q8N9H8 876 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 STEAP2Q8NFT2 490 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 OR2M3Q8NG83 312 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 OR2T4Q8NH00 348 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 SMIM12Q96EX1 92 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 THOC3Q96J01 351 aaKnown RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 Q96M66 194 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 DOCK7Q96N67 2140 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 OR8B4Q96RC9 309 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 GPX7Q96SL4 187 aaPredicted RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 SDHCQ99643 169 aaPredicted RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 SPRY4Q9C004 299 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 YAE1D1Q9NRH1 226 aa5.41□□□□□ -1.54
SSBP1-213ENST00000496622 MRPL22Q9NWU5 206 aaKnown RBP5.41□□□□□ -1.54
SSBP1-213ENST00000496622 YLPM1P49750 1951 aaKnown RBP5.4□□□□□ -1.54
SSBP1-213ENST00000496622 TRBV2A0A0J9YWF9 115 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 C20orf202A1L168 122 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 PRSS37A4D1T9 235 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 H3BS24 57 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF593O00488 134 aaPredicted RBP5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SSNA1O43805 119 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 ZIC3O60481 467 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SCGB2A1O75556 95 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 TRAPPC6AO75865 159 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 IFNA17P01571 189 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SPARCP09486 303 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 DPP4P27487 766 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 ARL3P36405 182 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SSR4P51571 173 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 RRAS2P62070 204 aaPredicted RBP5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SELENOTP62341 195 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 RPS15P62841 145 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms