RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 TMEM17Q86X19 198 aa7.35□□□□□ -1.23
U2AF1-212ENST00000496462 ZNF565Q8N9K5 539 aa7.35□□□□□ -1.23
U2AF1-212ENST00000496462 PXT1Q8NFP0 134 aa7.35□□□□□ -1.23
U2AF1-212ENST00000496462 MCFD2Q8NI22 146 aa7.35□□□□□ -1.23
U2AF1-212ENST00000496462 DERL3Q96Q80 235 aa7.35□□□□□ -1.23
U2AF1-212ENST00000496462 HS3ST6Q96QI5 342 aa7.35□□□□□ -1.23
U2AF1-212ENST00000496462 METTL17Q9H7H0 456 aaPredicted RBP7.35□□□□□ -1.23
U2AF1-212ENST00000496462 IGHV3-64DA0A0J9YX35 117 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 A6NIN4 97 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 ZSCAN5BA6NJL1 495 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 C3orf80F5H4A9 247 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 TOR1AO14656 332 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 CLPXO76031 633 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 IFNA6P05013 189 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 LIPFP07098 398 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 ZNF182P17025 639 aaPredicted RBP7.34□□□□□ -1.23
U2AF1-212ENST00000496462 IL24Q13007 206 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 IL13RA2Q14627 380 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 DTX3Q8N9I9 347 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 RAB40AQ8WXH6 277 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 RPL3LQ92901 407 aaKnown RBP7.34□□□□□ -1.23
U2AF1-212ENST00000496462 SLAMF9Q96A28 289 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 GAL3ST2Q9H3Q3 398 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 WIPI2Q9Y4P8 454 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 ENSAO43768 121 aaKnown RBP7.34□□□□□ -1.23
U2AF1-212ENST00000496462 CA11O75493 328 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 PAHP00439 452 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 CBX5P45973 191 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 PDZK1IP1Q13113 114 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 IRF3Q14653 427 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 ZNF181Q2M3W8 571 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 MPV17LQ2QL34 196 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 TMEM155Q4W5P6 130 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 DCDC5Q6ZRR9 648 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 OR4D6Q8NGJ1 314 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 BORCS5Q969J3 196 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 DGCR14Q96DF8 476 aaKnown RBP7.34□□□□□ -1.23
U2AF1-212ENST00000496462 HEXA-AS1Q9H8Q6 139 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 OR6C3Q9NZP0 311 aa7.34□□□□□ -1.23
U2AF1-212ENST00000496462 ADGRG4Q8IZF6 3080 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 LOC100289279A0A1B0GTE1 492 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 TMPRSS2O15393 492 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 KNG1P01042 644 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 CALCBP10092 127 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 AP3S2P59780 193 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 HES5Q5TA89 166 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 OR52W1Q6IF63 320 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 PRSS35Q8N3Z0 413 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 SOX7Q9BT81 388 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 TXNL4BQ9NX01 149 aaKnown RBP7.34□□□□□ -1.24
U2AF1-212ENST00000496462 ING3Q9NXR8 418 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 TRAPPC2LQ9UL33 140 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 FAM96BQ9Y3D0 163 aa7.34□□□□□ -1.24
U2AF1-212ENST00000496462 F8P00451 2351 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 A0A075B6Q4 140 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 SLC17A2O00624 439 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 GSTT2BP0CG30 244 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 FGF9P31371 208 aaPredicted RBP7.33□□□□□ -1.24
U2AF1-212ENST00000496462 IL2RGP31785 369 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 SCAND1P57086 179 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 ARPC4P59998 168 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF404Q494X3 552 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 AVPI1Q5T686 147 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 CYB5R2Q6BCY4 276 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 LRP11Q86VZ4 500 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 SCCPDHQ8NBX0 429 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 GCDHQ92947 438 aaPredicted RBP7.33□□□□□ -1.24
U2AF1-212ENST00000496462 FAM3DQ96BQ1 224 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 ETAA1Q9NY74 926 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 ST3GAL6Q9Y274 331 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 E9PI62 339 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 AKR7A2O43488 359 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 GLAP06280 429 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 FPR2P25090 351 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 MAGEB1P43366 347 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 HNRNPA0Q13151 305 aaKnown RBP7.33□□□□□ -1.24
U2AF1-212ENST00000496462 EDDM3AQ14507 147 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 MBD6Q96DN6 1003 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 FOXC2Q99958 501 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 ABCB10Q9NRK6 738 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 COMMD3Q9UBI1 195 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 MED12LQ86YW9 2145 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 TRBV5-5A0A0J9YX44 114 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 TMEM30CPA0ZSE6 113 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 B4DSR2 109 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
U2AF1-212ENST00000496462 SOD3P08294 240 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 CD80P33681 288 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 P2RY14Q15391 338 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 GRK1Q15835 563 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 METTL11BQ5VVY1 283 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 MOB1BQ7L9L4 216 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 FUNDC2Q9BWH2 189 aa7.33□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF503-AS2A6NEH8 195 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FUT3P21217 361 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 BLVRBP30043 206 aaPredicted RBP7.32□□□□□ -1.24
U2AF1-212ENST00000496462 GATA4P43694 442 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 NANOS3P60323 173 aaKnown RBP7.32□□□□□ -1.24
U2AF1-212ENST00000496462 TRIQKQ629K1 86 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 ANKRD13BQ86YJ7 626 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms