RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 OR5R1Q8NH85 324 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 LINC01006Q8NI28 216 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 RORBQ92753 470 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 NRIP2Q9BQI9 281 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 FAM234AQ9H0X4 552 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 PLEKHA1Q9HB21 404 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 C19orf12Q9NSK7 152 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 OR14J1Q9UGF5 321 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 ORC6Q9Y5N6 252 aa10.42□□□□□ -0.74
PTPRF-214ENST00000496043 GATBO75879 557 aaKnown RBP10.41□□□□□ -0.74
PTPRF-214ENST00000496043 TK1P04183 234 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 CHRM2P08172 466 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 TGFBR2P37173 567 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 ERVK11-1P61568 191 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 SRSF4Q08170 494 aaKnown RBP10.41□□□□□ -0.74
PTPRF-214ENST00000496043 UBE2V2Q15819 145 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 DHRS7BQ6IAN0 325 aaPredicted RBP10.41□□□□□ -0.74
PTPRF-214ENST00000496043 BRICD5Q6PL45 260 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 KCTD20Q7Z5Y7 419 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 CALHM1Q8IU99 346 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 MKXQ8IYA7 352 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 C10orf67Q8IYJ2 551 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 BEND2Q8NDZ0 799 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 OR4M1Q8NGD0 313 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 TRMT10AQ8TBZ6 339 aaKnown RBP10.41□□□□□ -0.74
PTPRF-214ENST00000496043 WFDC12Q8WWY7 111 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 PYDC1Q8WXC3 89 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 UBE2FQ969M7 185 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 C10orf35Q96D05 121 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 CITED1Q99966 193 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 C16orf95Q9H693 158 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 HES4Q9HCC6 221 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 IMPAD1Q9NX62 359 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 VPREB3Q9UKI3 123 aa10.41□□□□□ -0.74
PTPRF-214ENST00000496043 H3BSH0 61 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 TIMM23O14925 209 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 ANGPTL7O43827 346 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 CLPXO76031 633 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 CEBPDP49716 269 aaPredicted RBP10.4□□□□□ -0.74
PTPRF-214ENST00000496043 ZNF85Q03923 595 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 TP53I3Q53FA7 332 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 SLC25A30Q5SVS4 291 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 TMEM244Q5VVB8 128 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 MEDAGQ5VYS4 303 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 HCP5Q6MZN7 132 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 Q6ZSV7 163 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 FAM220AQ7Z4H9 259 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 EGFL6Q8IUX8 553 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 BATF2Q8N1L9 274 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 BORCS8Q96FH0 119 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 HRASLS5Q96KN8 279 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 MEGF9Q9H1U4 602 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 USE1Q9NZ43 259 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 GNG8Q9UK08 70 aa10.4□□□□□ -0.74
PTPRF-214ENST00000496043 DAPL1A0PJW8 107 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 SNTNA6NMZ2 147 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 K7N7A8 449 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 M0QZ24 198 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 ENTPD6O75354 484 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 TSPAN9O75954 239 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 INMTO95050 263 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 ALPLP05186 524 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 UBCP0CG48 685 aaKnown RBP10.39□□□□□ -0.75
PTPRF-214ENST00000496043 ATP1B3P54709 279 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 LGALS4P56470 323 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 ERVFRD-1P60508 538 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 SNRPGP62308 76 aaKnown RBP10.39□□□□□ -0.75
PTPRF-214ENST00000496043 COL10A1Q03692 680 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 CNN3Q15417 329 aaKnown RBP10.39□□□□□ -0.75
PTPRF-214ENST00000496043 OCLNQ16625 522 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 ZIK1Q3SY52 487 aaPredicted RBP10.39□□□□□ -0.75
PTPRF-214ENST00000496043 ZFP1Q6P2D0 407 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 CCDC121Q6ZUS5 278 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 RDH10Q8IZV5 341 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 PRSS35Q8N3Z0 413 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 C11orf42Q8N5U0 333 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 PP6455Q8WZ26 134 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 RNFT2Q96EX2 444 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 CEP19Q96LK0 163 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 SSX3Q99909 188 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 CHST5Q9GZS9 411 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 MTCH1Q9NZJ7 389 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 MGAM2Q2M2H8 2515 aa10.39□□□□□ -0.75
PTPRF-214ENST00000496043 IGKV1-27A0A075B6S5 117 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 LOC107986453A0A1B0GWG9 222 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 CYB5AP00167 134 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 KIR3DL2P43630 455 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 RBP2P50120 134 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 ALDH3A2P51648 485 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 PROK1P58294 105 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 KRTAP10-3P60369 221 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 ISL1P61371 349 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 ACTC1P68032 377 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 ACTA1P68133 377 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 KPNB1Q14974 876 aaKnown RBP10.38□□□□□ -0.75
PTPRF-214ENST00000496043 AANATQ16613 207 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 SLC35E4Q6ICL7 350 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 SLC25A26Q70HW3 274 aa10.38□□□□□ -0.75
PTPRF-214ENST00000496043 ASCC1Q8N9N2 400 aaKnown RBP10.38□□□□□ -0.75
PTPRF-214ENST00000496043 DNAAF1Q8NEP3 725 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms