RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 SRPXP78539 464 aa11.35□□□□□ -0.59
SHOX2-205ENST00000490689 DEGS2Q6QHC5 323 aa11.35□□□□□ -0.59
SHOX2-205ENST00000490689 RARRES2Q99969 163 aa11.35□□□□□ -0.59
SHOX2-205ENST00000490689 PECRQ9BY49 303 aa11.35□□□□□ -0.59
SHOX2-205ENST00000490689 CA14Q9ULX7 337 aa11.35□□□□□ -0.59
SHOX2-205ENST00000490689 ICE1Q9Y2F5 2266 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 CACNA1EQ15878 2313 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 A0A1B0GV90 55 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 CXorf65A6NEN9 183 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 SEC14L6B5MCN3 397 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 FOXS1O43638 330 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 BMP5P22003 454 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 RNF4P78317 190 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 RUNX1Q01196 453 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 CEBPEQ15744 281 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 MPV17LQ2QL34 196 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 ZNF343Q6P1L6 599 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 ADAMTS17Q8TE56 1095 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 SH3BGRL3Q9H299 93 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 GCM1Q9NP62 436 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 A0A1W2PPV4 95 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 H0YIZ8 118 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 H0YL77 283 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 ADAM20O43506 726 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 SOX15O60248 233 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 ABHD16AO95870 558 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 BAXQ07812 192 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 TMEM267Q0VDI3 215 aaPredicted RBP11.34□□□□□ -0.59
SHOX2-205ENST00000490689 LTC4SQ16873 150 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 OR4F4Q96R69 305 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 GPHA2Q96T91 129 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 NAA60Q9H7X0 242 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 DOK5Q9P104 306 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 TNFSF14O43557 240 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 PDGFBP01127 241 aaPredicted RBP11.34□□□□□ -0.59
SHOX2-205ENST00000490689 CD200P41217 278 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 HBG1P69891 147 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 HBG2P69892 147 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 H3F3AP84243 136 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 FUT7Q11130 342 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 ZNF600Q6ZNG1 722 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 AAED1Q7RTV5 226 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 PACRGQ96M98 296 aaPredicted RBP11.34□□□□□ -0.59
SHOX2-205ENST00000490689 GGACTQ9BVM4 153 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 CARHSP1Q9Y2V2 147 aaKnown RBP11.34□□□□□ -0.59
SHOX2-205ENST00000490689 POMT1Q9Y6A1 747 aa11.34□□□□□ -0.59
SHOX2-205ENST00000490689 NRASP01111 189 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 FBP1P09467 338 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 HKR1P10072 659 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 RSPO4Q2I0M5 234 aaPredicted RBP11.33□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF880Q6PDB4 577 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 ST8SIA1Q92185 356 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 AQP3Q92482 292 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 KLF15Q9UIH9 416 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 PPP1R3CQ9UQK1 317 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 SLCO1B1Q9Y6L6 691 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 A0A1B0GX78 115 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 CLDN34H7C241 214 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 RNF224P0DH78 156 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 HAAOP46952 286 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 RPL29P47914 159 aaKnown RBP11.33□□□□□ -0.6
SHOX2-205ENST00000490689 MMP16P51512 607 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF813Q6ZN06 617 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 CYB561D1Q8N8Q1 229 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 PTPMT1Q8WUK0 201 aaPredicted RBP11.33□□□□□ -0.6
SHOX2-205ENST00000490689 CTHRC1Q96CG8 243 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 OR6C1Q96RD1 312 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 GPX7Q96SL4 187 aaPredicted RBP11.33□□□□□ -0.6
SHOX2-205ENST00000490689 PLEKHF2Q9H8W4 249 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 ANXA10Q9UJ72 324 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 SCRG1O75711 98 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 MMP9P14780 707 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 PSMB3P49720 205 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 NCR3LG1Q68D85 454 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 KCNIP4Q6PIL6 250 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 OR11L1Q8NGX0 322 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 ERGIC1Q969X5 290 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 ZNF107Q9UII5 783 aaPredicted RBP11.33□□□□□ -0.6
SHOX2-205ENST00000490689 HEATR5AQ86XA9 2040 aa11.33□□□□□ -0.6
SHOX2-205ENST00000490689 TANC1Q9C0D5 1861 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 PNLIPP16233 465 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 HABP2Q14520 560 aaPredicted RBP11.32□□□□□ -0.6
SHOX2-205ENST00000490689 UBE2V2Q15819 145 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 RNF133Q8WVZ7 376 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 PTRH2Q9Y3E5 179 aaKnown RBP11.32□□□□□ -0.6
SHOX2-205ENST00000490689 IGLV1-36A0A0B4J1U3 117 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 OR6C6A6NF89 314 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 OTX2P32243 289 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 ERVS71-1P61550 626 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 UNC119Q13432 240 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 OR13D1Q8NGV5 346 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 SOX7Q9BT81 388 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 RNF126Q9BV68 326 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 SLC2A8Q9NY64 477 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 HS3ST3A1Q9Y663 406 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 SPTY2D1-AS1A0A0U1RR47 76 aa11.32□□□□□ -0.6
SHOX2-205ENST00000490689 GATCO43716 136 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms