RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TPK1Q9H3S4 243 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 PRORYQ9H606 182 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 FBXO6Q9NRD1 293 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 SHPKQ9UHJ6 478 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 OPN4Q9UHM6 478 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF337Q9Y3M9 751 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 C9orf84Q5VXU9 1444 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 ADGRL3Q9HAR2 1447 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 MN1Q10571 1320 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 ARID1AO14497 2285 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 IGLV11-55A0A075B6I3 123 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 IGHV2OR16-5A0A0B4J2B6 119 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 FAM240AA0A1B0GVK7 77 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF726A6NNF4 738 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 M0R1B8 84 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 TNFRSF11BO00300 401 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 CCRL2O00421 344 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 PEX7O00628 323 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 SS18L1O75177 396 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF324O75467 553 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 KRT75O95678 551 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 CD8AP01732 235 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 TYMSP04818 313 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 CD37P11049 281 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 CXCL5P42830 114 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 GALR1P47211 349 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 IDH3GP51553 393 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 UBE2E1P51965 193 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 PPP1CBP62140 327 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 SRSF6Q13247 344 aaKnown RBP2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 TBC1D28Q2M2D7 210 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 TTLL9Q3SXZ7 439 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 SPIN4Q56A73 249 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 SPIN3Q5JUX0 258 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 EPGNQ6UW88 154 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 NPSR1Q6W5P4 371 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 H2AFVQ71UI9 128 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 THOC6Q86W42 341 aaKnown RBP2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 RAB43Q86YS6 212 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 BLIDQ8IZY5 108 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 DAW1Q8N136 415 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 RIBC1Q8N443 379 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 METTL13Q8N6R0 699 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR51Q1Q8NH59 317 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 NELFBQ8WX92 580 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 RAD51AP1Q96B01 352 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 CREB3L1Q96BA8 519 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 MRAP2Q96G30 205 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 UBE2E2Q96LR5 201 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 Q96MT0 163 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 P2RX4Q99571 388 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 UGT2B28Q9BY64 529 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 COA1Q9GZY4 146 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 RPF2Q9H7B2 306 aaKnown RBP2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 RHOFQ9HBH0 211 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM27Q9HBJ8 222 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 ABCB9Q9NP78 766 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 FBXO8Q9NRD0 319 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 ARL2BPQ9Y2Y0 163 aa2.98□□□□□ -1.93
HMGB1P38-201ENST00000490557 MAPK8IP3Q9UPT6 1336 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 KIR2DL5BA0A0G2JN68 375 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 KIR2DL5BA0A0G2JPC4 375 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF233A6NK53 670 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 SYCE1LA8MT33 242 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 EFCAB9A8MZ26 197 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 C21orf140B9A014 251 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM238C9JI98 176 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 CXCR6O00574 342 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 UBDO15205 165 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 SERPINA1P01009 418 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 BCHEP06276 602 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 PGA4P0DJD7 388 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 PGA3P0DJD8 388 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 PGA5P0DJD9 388 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 SLC2A1P11166 492 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 F2RP25116 425 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 GRPRP30550 384 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 RND2P52198 227 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 CRISP3P54108 245 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 RAB38P57729 211 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR4D2P58180 307 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 SLC35A1P78382 337 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 MXD1Q05195 221 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 REG3AQ06141 175 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF266Q14584 549 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 ALX1Q15699 326 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 DEFB116Q30KQ4 102 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM176BQ3YBM2 270 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM255AQ5JRV8 349 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 SYPL2Q5VXT5 272 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 CD200R1LQ6Q8B3 271 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 LRRN1Q6UXK5 716 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 FAM92BQ6ZTR7 304 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 CALHM1Q8IU99 346 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 KIR2DL5AQ8N109 375 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 SPICQ8N5J4 248 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 ACBD4Q8NC06 268 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 KIR2DL5BQ8NHK3 375 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZFAND1Q8TCF1 268 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZFP90Q8TF47 636 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms