RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 FAM230AA0A1W2PPH8 454 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 OOEPA6NGQ2 149 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 A8MV72 311 aaPredicted RBP6.56□□□□□ -1.36
SSR1-210ENST00000489567 KIAA1324LA8MWY0 1029 aaPredicted RBP6.56□□□□□ -1.36
SSR1-210ENST00000489567 B4DSR2 109 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 LGALS8O00214 317 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 MYL12BO14950 172 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 PHF1O43189 567 aaPredicted RBP6.56□□□□□ -1.36
SSR1-210ENST00000489567 DENRO43583 198 aaKnown RBP6.56□□□□□ -1.36
SSR1-210ENST00000489567 GYPAP02724 150 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 MSMBP08118 114 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 WNT2P09544 360 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 DUX4L2P0CJ85 424 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 DUX4L3P0CJ86 424 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 DUX4L4P0CJ87 422 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 DUX4L5P0CJ88 424 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 DUX4L6P0CJ89 424 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 DUX4L7P0CJ90 424 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 ZNF12P17014 697 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 AMY2BP19961 511 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 SOX2P48431 317 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 ARHGDIBP52566 201 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 VBP1P61758 197 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 RPS11P62280 158 aaKnown RBP eCLIP6.56□□□□□ -1.36
SSR1-210ENST00000489567 POLR2GP62487 172 aaKnown RBP eCLIP6.56□□□□□ -1.36
SSR1-210ENST00000489567 LCN2P80188 198 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 RNLSQ5VYX0 342 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 TEX36Q5VZQ5 186 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 FAM166AQ6J272 317 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 FAM122CQ6P4D5 195 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 CRIP3Q6Q6R5 217 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 DUX4L9Q6RFH8 374 aaPredicted RBP6.56□□□□□ -1.36
SSR1-210ENST00000489567 BATF2Q8N1L9 274 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 MUC20Q8N307 709 aaPredicted RBP6.56□□□□□ -1.36
SSR1-210ENST00000489567 SPICQ8N5J4 248 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 CCDC54Q8NEL0 328 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 OR5T2Q8NGG2 359 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 PP6455Q8WZ26 134 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 GHSRQ92847 366 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 MYDGFQ969H8 173 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 C10orf35Q96D05 121 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 ORAI1Q96D31 301 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 RAB39BQ96DA2 213 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 SPACA5Q96QH8 159 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 COMMD4Q9H0A8 199 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 TRIM36Q9NQ86 728 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 SNTG1Q9NSN8 517 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 DUX4Q9UBX2 424 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 PCDHB10Q9UN67 800 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 ERGIC3Q9Y282 383 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 TPRKBQ9Y3C4 175 aa6.56□□□□□ -1.36
SSR1-210ENST00000489567 MTORP42345 2549 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 F8VVB4 439 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 F8VWA3 439 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 ST8SIA5O15466 376 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 ZNF20P17024 532 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 ATF1P18846 271 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 CELP19835 753 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 MED21Q13503 144 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 ZNF841Q6ZN19 808 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 DCDC5Q6ZRR9 648 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 IL17RELQ6ZVW7 336 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 UTS2BQ765I0 119 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 CROCCP3Q8IVE0 287 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 FGFRL1Q8N441 504 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 PARP16Q8N5Y8 322 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 OR51A2Q8NGJ7 313 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 OR13C9Q8NGT0 318 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 OR10Z1Q8NGY1 313 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 HAVCR2Q8TDQ0 301 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 TSEN15Q8WW01 171 aaKnown RBP6.55□□□□□ -1.36
SSR1-210ENST00000489567 TMEM186Q96B77 213 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 SMURF1Q9HCE7 757 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 MMP26Q9NRE1 261 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 HIF1ANQ9NWT6 349 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 DHDHQ9UQ10 334 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 ZNF281Q9Y2X9 895 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 ARHGAP32A7KAX9 2087 aa6.55□□□□□ -1.36
SSR1-210ENST00000489567 ZFHX3Q15911 3703 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 TRAV38-1A0A0B4J264 116 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 TRAPPC2LH3BP13 241 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 J3QT63 122 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 RGS10O43665 173 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 GATBO75879 557 aaKnown RBP6.54□□□□□ -1.36
SSR1-210ENST00000489567 CRYZL1O95825 349 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 PLATP00750 562 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 SELLP14151 372 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 HOXB4P17483 251 aaPredicted RBP6.54□□□□□ -1.36
SSR1-210ENST00000489567 MPZP25189 248 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 AZGP1P25311 298 aaKnown RBP6.54□□□□□ -1.36
SSR1-210ENST00000489567 MAP2K4P45985 399 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 FUT6P51993 359 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 DVL1P1P54792 670 aaPredicted RBP6.54□□□□□ -1.36
SSR1-210ENST00000489567 INSL4Q14641 139 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 RBM48Q5RL73 367 aaKnown RBP6.54□□□□□ -1.36
SSR1-210ENST00000489567 FOXB2Q5VYV0 432 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 PRSS48Q7RTY5 328 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 ZNF573Q86YE8 665 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 OR51F2Q8NH61 342 aa6.54□□□□□ -1.36
SSR1-210ENST00000489567 GPR148Q8TDV2 347 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms