RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 IL18R1Q13478 541 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 ZNF676Q8N7Q3 588 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 ASCC1Q8N9N2 400 aaKnown RBP12.82□□□□□ -0.36
USP48-210ENST00000489108 Q8NFD4 153 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 OR9Q2Q8NGE9 314 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 NRIP2Q9BQI9 281 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 SLC22A13Q9Y226 551 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 SESN1Q9Y6P5 492 aa12.82□□□□□ -0.36
USP48-210ENST00000489108 FAM183AA6NL82 134 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 J3QT63 122 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 GASTP01350 101 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 LYNP07948 512 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 SNRNP70P08621 437 aaKnown RBP12.81□□□□□ -0.36
USP48-210ENST00000489108 BRS3P32247 399 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 LUMP51884 338 aaPredicted RBP12.81□□□□□ -0.36
USP48-210ENST00000489108 RASSF6Q6ZTQ3 369 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 GDPD3Q7L5L3 318 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 KLHL30-AS1Q8NEE0 82 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 OR4P4Q8NGL7 312 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 BTBD10Q9BSF8 475 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 CLEC7AQ9BXN2 247 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 TMEM133Q9H2Q1 129 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 EFCAB1Q9HAE3 211 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 HES4Q9HCC6 221 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 TAS2R1Q9NYW7 299 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 DPM3Q9P2X0 92 aa12.81□□□□□ -0.36
USP48-210ENST00000489108 NDUFAB1O14561 156 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 GSC2O15499 205 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 ZNF737O75373 536 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 CHATP28329 748 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 ECI1P42126 302 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 RAB25P57735 213 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 PSMA6P60900 246 aaKnown RBP12.8□□□□□ -0.36
USP48-210ENST00000489108 MEF2CQ06413 473 aaPredicted RBP12.8□□□□□ -0.36
USP48-210ENST00000489108 RIPPLY1Q0D2K3 151 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 CGB2Q6NT52 195 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 ZNF573Q86YE8 665 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 OTOSQ8NHW6 89 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 MCUR1Q96AQ8 359 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 OTULINQ96BN8 352 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 NIPAL2Q9H841 368 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 ZFP57Q9NU63 452 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 ARMC1Q9NVT9 282 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 ABCD2Q9UBJ2 740 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 HHLA2Q9UM44 414 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 BAIAP2Q9UQB8 552 aa12.8□□□□□ -0.36
USP48-210ENST00000489108 RIIAD1A6NNX1 92 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 GMNNO75496 209 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 MMP23AO75900 390 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 DNAJC8O75937 253 aaPredicted RBP12.79□□□□□ -0.36
USP48-210ENST00000489108 NRASP01111 189 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 IFNGP01579 166 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 FABP3P05413 133 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 SLC6A1P30531 599 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 OR3A4PP47883 348 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 EDDM3AQ14507 147 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 SAMD4BQ5PRF9 694 aaKnown RBP12.79□□□□□ -0.36
USP48-210ENST00000489108 BAIAP2L2Q6UXY1 529 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 HACD2Q6Y1H2 254 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 ZBTB49Q6ZSB9 765 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 TRPM8Q7Z2W7 1104 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 RNF148Q8N7C7 305 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 TPRX1Q8N7U7 411 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 OR2T33Q8NG76 320 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 NOL4LQ96MY1 436 aaPredicted RBP12.79□□□□□ -0.36
USP48-210ENST00000489108 RCHY1Q96PM5 261 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 LYSTQ99698 3801 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 OR51V1Q9H2C8 321 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 GORASP2Q9H8Y8 452 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 PALMDQ9NP74 551 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 PIGLQ9Y2B2 252 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 POLDIP2Q9Y2S7 368 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 KLHDC2Q9Y2U9 406 aa12.79□□□□□ -0.36
USP48-210ENST00000489108 A0A0U1RQV5 110 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 hADV38S2A0JD32 116 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 CCL24O00175 119 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 SELENOFO60613 162 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 SOX14O95416 240 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 ZNF3P17036 446 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 HMGA2P52926 109 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 GP2P55259 537 aaKnown RBP12.78□□□□□ -0.36
USP48-210ENST00000489108 PSME3P61289 254 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 ERVK11-1P61568 191 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 ZNF684Q5T5D7 378 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 COMMD2Q86X83 199 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 ABHD12Q8N2K0 398 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 ZNF454Q8N9F8 522 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 OR51E1Q8TCB6 317 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 RAX2Q96IS3 184 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 MYLK2Q9H1R3 596 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 GPR84Q9NQS5 396 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 PAPOLBQ9NRJ5 636 aaKnown RBP12.78□□□□□ -0.36
USP48-210ENST00000489108 CMC2Q9NRP2 79 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 FGFR1OP2Q9NVK5 253 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 ENPP5Q9UJA9 477 aa12.78□□□□□ -0.36
USP48-210ENST00000489108 TMEM82A0PJX8 343 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 PQLC2LA1A4F0 135 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.37
USP48-210ENST00000489108 ATP6V1B1P15313 513 aa12.77□□□□□ -0.37
USP48-210ENST00000489108 H2AFXP16104 143 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms