RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ATP1B3P54709 279 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 RIPPLY3P57055 190 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 C11orf91Q3C1V1 193 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 Q499Y3 187 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 DUX4L9Q6RFH8 374 aaPredicted RBP15.5■□□□□ 0.07
PTCD3-217ENST00000488801 C1orf229Q6ZS94 237 aaPredicted RBP15.5■□□□□ 0.07
PTCD3-217ENST00000488801 OR51A2Q8NGJ7 313 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 ZNF488Q96MN9 340 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 GAFA1Q96PS6 74 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 MMP26Q9NRE1 261 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 MTCH1Q9NZJ7 389 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 DUX4Q9UBX2 424 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 LPAR3Q9UBY5 353 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 CLN8Q9UBY8 286 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 CDC42EP3Q9UKI2 254 aa15.5■□□□□ 0.07
PTCD3-217ENST00000488801 A0A0G2JMP0 313 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 A0A0X1KG70 313 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 OR2AT4A6NND4 320 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 J3QLI3 93 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 GPX5O75715 221 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 CD2P06729 351 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 OCM2P0CE71 109 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 PSG2P11465 335 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 IGFBP3P17936 291 aaPredicted RBP15.49■□□□□ 0.07
PTCD3-217ENST00000488801 SOX2P48431 317 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 ZP1P60852 638 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 GNB2P62879 340 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 SMIM21Q3B7S5 101 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 FAM216BQ8N7L0 139 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 OR4M2Q8NGB6 313 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 OR5D14Q8NGL3 314 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 TMIGD2Q96BF3 282 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 ISYNA1Q9NPH2 558 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 TAS2R4Q9NYW5 299 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 INSIG2Q9Y5U4 225 aa15.49■□□□□ 0.07
PTCD3-217ENST00000488801 IGHV2-70DA0A0C4DH43 119 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 C22orf46C9J442 243 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 F8VVB4 439 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 F8VWA3 439 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 SIGLEC5O15389 551 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 TMPRSS2O15393 492 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 MRPS14O60783 128 aaKnown RBP15.48■□□□□ 0.07
PTCD3-217ENST00000488801 SC5DO75845 299 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 AVPP01185 164 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 GPR50Q13585 617 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 SLC25A26Q70HW3 274 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 SDSLQ96GA7 329 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 POM121Q96HA1 1249 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 CEP19Q96LK0 163 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 CCL13Q99616 98 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 SNTG1Q9NSN8 517 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 DNAJB11Q9UBS4 358 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 OPN4Q9UHM6 478 aa15.48■□□□□ 0.07
PTCD3-217ENST00000488801 IGKV1-12A0A0C4DH73 117 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 PNMA8CA0A1B0GUJ8 204 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 FSHBP01225 129 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 IGKV1D-12P01611 117 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 SELLP14151 372 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 RAB3AP20336 220 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 MTCP1P56278 107 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 GMFBP60983 142 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 MLLT11Q13015 90 aaPredicted RBP15.47■□□□□ 0.07
PTCD3-217ENST00000488801 PDZK1IP1Q13113 114 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 TPBGQ13641 420 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 DCAF12L2Q5VW00 463 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 SLC36A1Q7Z2H8 476 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 FGFRL1Q8N441 504 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 SLAMF9Q96A28 289 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 DERL3Q96Q80 235 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 SPACA5Q96QH8 159 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 OR14A2Q96R54 314 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 YTHDF1Q9BYJ9 559 aaKnown RBP15.47■□□□□ 0.07
PTCD3-217ENST00000488801 OR5V1Q9UGF6 321 aa15.47■□□□□ 0.07
PTCD3-217ENST00000488801 ZNF879B4DU55 563 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 DVL1O14640 695 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 PIN1P1O15428 100 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 KDM4BO94953 1096 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 TFF1P04155 84 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 ALDOBP05062 364 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 MAP2K4P45985 399 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 PAX8Q06710 450 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 MED22Q15528 200 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 KISS1Q15726 138 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 DGUOKQ16854 277 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 CHRFAM7AQ494W8 412 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 Q8IYB0 196 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 SAXO1Q8IYX7 474 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 OR5T2Q8NGG2 359 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 RAB40AQ8WXH6 277 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 ORAI1Q96D31 301 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 SHARPINQ9H0F6 387 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 SEBOXQ9HB31 216 aaPredicted RBP15.46■□□□□ 0.07
PTCD3-217ENST00000488801 ACOT13Q9NPJ3 140 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 MAB21L2Q9Y586 359 aa15.46■□□□□ 0.07
PTCD3-217ENST00000488801 TRAV8-7A0A075B6U6 113 aa15.45■□□□□ 0.06
PTCD3-217ENST00000488801 KIR2DS1A0A191URI9 304 aa15.45■□□□□ 0.06
PTCD3-217ENST00000488801 MAGEA13PA6NCF6 341 aa15.45■□□□□ 0.06
PTCD3-217ENST00000488801 NKX6-3A6NJ46 265 aa15.45■□□□□ 0.06
PTCD3-217ENST00000488801 SPRY1O43609 319 aaPredicted RBP15.45■□□□□ 0.06
PTCD3-217ENST00000488801 NXPH2O95156 264 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms