RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PAX6P26367 422 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 CFHR2P36980 270 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 CEBPDP49716 269 aaPredicted RBP4.86□□□□□ -1.63
CDHR3-213ENST00000488386 GPM6AP51674 278 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 BLVRAP53004 296 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 NANOS3P60323 173 aaKnown RBP4.86□□□□□ -1.63
CDHR3-213ENST00000488386 KLRD1Q13241 179 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 C1orf146Q5VVC0 180 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 FAHD1Q6P587 224 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 RBMS3Q6XE24 437 aaKnown RBP4.86□□□□□ -1.63
CDHR3-213ENST00000488386 USP43Q70EL4 1123 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 MOB3CQ70IA8 216 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 TCEANCQ8N8B7 351 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 SCCPDHQ8NBX0 429 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 PAPD5Q8NDF8 572 aaKnown RBP4.86□□□□□ -1.63
CDHR3-213ENST00000488386 OR5K1Q8NHB7 308 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 OR51E1Q8TCB6 317 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 LHX4Q969G2 390 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 ERGIC1Q969X5 290 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 UPRTQ96BW1 309 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 RNF170Q96K19 258 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 TEAD3Q99594 435 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 PKP2Q99959 881 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 APOL4Q9BPW4 351 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 PBOV1Q9GZY1 135 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 SLC22A4Q9H015 551 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 RIBC2Q9H4K1 309 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 NIPAL2Q9H841 368 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 SIRT7Q9NRC8 400 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 GPR173Q9NS66 373 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 KRT84Q9NSB2 600 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 FAM206AQ9NX38 181 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 ONECUT1Q9UBC0 465 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 AASSQ9UDR5 926 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 LAMP5Q9UJQ1 280 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 IKZF2Q9UKS7 526 aa4.86□□□□□ -1.63
CDHR3-213ENST00000488386 A0A0U1RQK1 487 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 TMEM269A0A1B0GVZ9 245 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 MEX3AA1L020 520 aaKnown RBP4.85□□□□□ -1.63
CDHR3-213ENST00000488386 ZNF879B4DU55 563 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 ZNF732B4DXR9 585 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 G3V2T6 193 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 H0YIZ8 118 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 RAB27BO00194 218 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 P2RY10O00398 339 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 SYNGR1O43759 233 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 ENSAO43768 121 aaKnown RBP4.85□□□□□ -1.63
CDHR3-213ENST00000488386 RRP9O43818 475 aaKnown RBP4.85□□□□□ -1.63
CDHR3-213ENST00000488386 MMP9P14780 707 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 MDKP21741 143 aaPredicted RBP4.85□□□□□ -1.63
CDHR3-213ENST00000488386 GABRA2P47869 451 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 CXCR4P61073 352 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 SCGB2A2Q13296 93 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 ATP6AP1Q15904 470 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 DGUOKQ16854 277 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 MICBQ29980 383 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 SLC35D3Q5M8T2 416 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 GPR157Q5UAW9 335 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 TEX36Q5VZQ5 186 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 HIST2H2BDQ6DRA6 164 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 VMO1Q7Z5L0 202 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 SLC35F2Q8IXU6 374 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 ZDHHC23Q8IYP9 409 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 TEX29Q8N6K0 151 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 OR51G2Q8NGK0 314 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 FAM81AQ8TBF8 368 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 NPRL2Q8WTW4 380 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 ZFAND2BQ8WV99 257 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 PYDC1Q8WXC3 89 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 OR5P3Q8WZ94 311 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 H1FXQ92522 213 aaKnown RBP4.85□□□□□ -1.63
CDHR3-213ENST00000488386 WDFY2Q96P53 400 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 GAFA1Q96PS6 74 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 OR8B4Q96RC9 309 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 CIB1Q99828 191 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 MICU1Q9BPX6 476 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 RTL8AQ9BWD3 113 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 SIRPDQ9H106 197 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 OPA3Q9H6K4 179 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 YY1AP1Q9H869 796 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 SP140LQ9H930 580 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 ADGRL4Q9HBW9 690 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 GPR84Q9NQS5 396 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 SERTAD4Q9NUC0 356 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 ZNF391Q9UJN7 358 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 SLC22A13Q9Y226 551 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 PIGLQ9Y2B2 252 aa4.85□□□□□ -1.63
CDHR3-213ENST00000488386 LOC102723971A0A1B0GUV8 181 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 ANXA2P2A6NMY6 339 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 SRRM5B3KS81 715 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 SRSF10O75494 262 aaKnown RBP4.84□□□□□ -1.63
CDHR3-213ENST00000488386 NXPH3O95157 252 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 CST4P01036 141 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 IGLV2-14P01704 120 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 IGHV4-59P01825 116 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 TTRP02766 147 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 MELTFP08582 738 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 NDUFB7P17568 137 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 GLRA1P23415 457 aa4.84□□□□□ -1.63
CDHR3-213ENST00000488386 FASP25445 335 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms