RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 KRT72Q14CN4 511 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 CEACAM21Q3KPI0 293 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 TEX38Q6PEX7 206 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 CBLL1Q75N03 491 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 ABHD12Q8N2K0 398 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 OR4P4Q8NGL7 312 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 OR6K6Q8NGW6 343 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 ZNF596Q8TC21 504 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 NRIP2Q9BQI9 281 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 GID8Q9NWU2 228 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 SLC22A13Q9Y226 551 aa7.29□□□□□ -1.24
COL17A1-207ENST00000488320 FRAS1Q86XX4 4008 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 DSCAML1Q8TD84 2053 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 ARRDC5A6NEK1 342 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 OR5B21A6NL26 309 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 PSMD9O00233 223 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 CXCR6O00574 342 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 TOR1AO14656 332 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 MRASO14807 208 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 GSC2O15499 205 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 RPLP1P05386 114 aaKnown RBP7.28□□□□□ -1.24
COL17A1-207ENST00000488320 GYPBP06028 91 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 HCKP08631 526 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 FAM106CPP0CH98 169 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 RHCEP18577 417 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 MYF6P23409 242 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 CEACAM3P40198 252 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 MAP2K3P46734 347 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 HAAOP46952 286 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 VEGFCP49767 419 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 MEF2CQ06413 473 aaPredicted RBP7.28□□□□□ -1.24
COL17A1-207ENST00000488320 HES1Q14469 280 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 CXorf66Q5JRM2 361 aaPredicted RBP7.28□□□□□ -1.24
COL17A1-207ENST00000488320 TEX30Q5JUR7 227 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 PLCXD3Q63HM9 321 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 PRSS45Q7RTY3 260 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 SLC35E3Q7Z769 313 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 FOXRED2Q8IWF2 684 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 DRAM1Q8N682 238 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 DDB2Q92466 427 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 TM2D3Q9BRN9 247 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 CD300AQ9UGN4 299 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 HHLA2Q9UM44 414 aa7.28□□□□□ -1.24
COL17A1-207ENST00000488320 FXYD1O00168 92 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 DIRAS1O95057 198 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 IFNA6P05013 189 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 CDX1P47902 265 aaPredicted RBP7.27□□□□□ -1.25
COL17A1-207ENST00000488320 POU3F4P49335 361 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 SRSF7Q16629 238 aaKnown RBP eCLIP7.27□□□□□ -1.25
COL17A1-207ENST00000488320 PNLIPRP3Q17RR3 467 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 OR52W1Q6IF63 320 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 CCDC144NLQ6NUI1 221 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 WDR93Q6P2C0 686 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 C16orf89Q6UX73 402 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 TRAPPC6BQ86SZ2 158 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 RTN4RL2Q86UN3 420 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 ZNF573Q86YE8 665 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 EGFL6Q8IUX8 553 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 ERI1Q8IV48 349 aaKnown RBP7.27□□□□□ -1.25
COL17A1-207ENST00000488320 STPG2Q8N412 459 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 TPRX1Q8N7U7 411 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 SLC37A3Q8NCC5 494 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 OR11H1Q8NG94 326 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 OR52L1Q8NGH7 329 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 OR6N2Q8NGY6 317 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 IL17DQ8TAD2 202 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 RNF133Q8WVZ7 376 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 FAM162AQ96A26 154 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 CREB3L1Q96BA8 519 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 ABHD6Q9BV23 337 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 NIPAL2Q9H841 368 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 POLDIP2Q9Y2S7 368 aa7.27□□□□□ -1.25
COL17A1-207ENST00000488320 HECTD4Q9Y4D8 3996 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 FAM172BPA6NC97 362 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 NOS1APO75052 506 aaPredicted RBP7.26□□□□□ -1.25
COL17A1-207ENST00000488320 MMP23AO75900 390 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 GP9P14770 177 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 H2AFXP16104 143 aaPredicted RBP7.26□□□□□ -1.25
COL17A1-207ENST00000488320 SPNP16150 400 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 PEX2P28328 305 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 IFNGR2P38484 337 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 NUDT2P50583 147 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 BLVRAP53004 296 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 PRRX1P54821 245 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 SMIM11AP58511 58 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 BDH1Q02338 343 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 RIPPLY1Q0D2K3 151 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 GPR50Q13585 617 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 RBM39Q14498 530 aaKnown RBP7.26□□□□□ -1.25
COL17A1-207ENST00000488320 HNF4GQ14541 408 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 ZNF684Q5T5D7 378 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 TPTE2P1Q5T6R2 138 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 SHFQ7M4L6 423 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 ZNF429Q86V71 674 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 COMMD2Q86X83 199 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 RP9Q8TA86 221 aaKnown RBP7.26□□□□□ -1.25
COL17A1-207ENST00000488320 GNPDA2Q8TDQ7 276 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 THEM6Q8WUY1 208 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 DYDC1Q8WWB3 177 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 SNX22Q96L94 193 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms