RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 VCXQ9H320 206 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 XKR8Q9H6D3 395 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 DDX19AQ9NUU7 478 aaKnown RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 MYEF2Q9P2K5 600 aaKnown RBP3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 COMMD3-BMI1R4GMX3 469 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 ADGRG4Q8IZF6 3080 aa3.1□□□□□ -1.91
PRPF38A-203ENST00000487160 NOTCH2Q04721 2471 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 A0A1W2PNU3 283 aaPredicted RBP3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 F8VP50 259 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 H7C0C1 242 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 YKT6O15498 198 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 FCN3O75636 299 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 SCELO95171 688 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 TGM6O95932 706 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 HBE1P02100 147 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 IFNW1P05000 195 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 S100A9P06702 114 aaKnown RBP3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 CISD3P0C7P0 127 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 CSNK2A2P19784 350 aaPredicted RBP3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 MSR1P21757 451 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 ACOT2P49753 483 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 MNAT1P51948 309 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 CLDN18P56856 261 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 RAP1AP62834 184 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 ARG2P78540 354 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 CDH17Q12864 832 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 QPRTQ15274 297 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 BEX5Q5H9J7 111 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 MBOAT2Q6ZWT7 520 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 CD302Q8IX05 232 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 PRSS58Q8IYP2 241 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 TMEM86AQ8N2M4 240 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 CYB561D1Q8N8Q1 229 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 PROKR2Q8NFJ6 384 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 ABHD3Q8WU67 409 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 MRGPRFQ96AM1 343 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 GALNT14Q96FL9 552 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 LHX5Q9H2C1 402 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 SPNS1Q9H2V7 528 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 PIGUQ9H490 435 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 SAV1Q9H4B6 383 aaPredicted RBP3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 RPP21Q9H633 154 aaKnown RBP3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 EDA2RQ9HAV5 297 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 MRM3Q9HC36 420 aaKnown RBP3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 PRSS16Q9NQE7 514 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 ZNF222Q9UK12 451 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 RCL1Q9Y2P8 373 aaKnown RBP3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 CSMD2Q7Z408 3487 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 SDK2Q58EX2 2172 aa3.09□□□□□ -1.91
PRPF38A-203ENST00000487160 TNRC6AQ8NDV7 1962 aaKnown RBP3.09□□□□□ -1.92
PRPF38A-203ENST00000487160 NBASA2RRP1 2371 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 LINC00854A0A1B0GVQ3 168 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 A0A1W2PP18 115 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 BCKDKO14874 412 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 KDELR3O43731 214 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 RP2O75695 350 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 SLC25A14O95258 325 aaPredicted RBP3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 HLA-HP01893 362 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 IVLP07476 585 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 CD3GP09693 182 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 PGAM1P18669 254 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 CD82P27701 267 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 BCAP31P51572 246 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 UBE2NP61088 152 aaKnown RBP3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 RPS15AP62244 130 aaKnown RBP3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 TFAMQ00059 246 aaKnown RBP3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 RAD51Q06609 339 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 PTGES3Q15185 160 aaKnown RBP3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 TPTE2P1Q5T6R2 138 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 ABHD12BQ7Z5M8 362 aaPredicted RBP3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 CBLN2Q8IUK8 224 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 SAXO1Q8IYX7 474 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 PGAM4Q8N0Y7 254 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 CSGALNACT2Q8N6G5 542 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 CHST4Q8NCG5 386 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 OR10G2Q8NGC3 310 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 RAB1CQ92928 201 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 C19orf60Q96EN9 201 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 CERS2Q96G23 380 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 JSRP1Q96MG2 331 aaPredicted RBP3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 ZNF317Q96PQ6 595 aaPredicted RBP3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 FOXC2Q99958 501 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 TIPINQ9BVW5 301 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 IL22Q9GZX6 179 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 ASB7Q9H672 318 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 HAUS4Q9H6D7 363 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 CTSFQ9UBX1 484 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 PSG11Q9UQ72 335 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 ANKRD36A6QL64 1941 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 CHD5Q8TDI0 1954 aa3.08□□□□□ -1.92
PRPF38A-203ENST00000487160 SETD2Q9BYW2 2564 aaPredicted RBP3.07□□□□□ -1.92
PRPF38A-203ENST00000487160 APCP25054 2843 aa3.07□□□□□ -1.92
PRPF38A-203ENST00000487160 A0A0J9YYE9 177 aa3.07□□□□□ -1.92
PRPF38A-203ENST00000487160 A0A1B0GUH1 482 aa3.07□□□□□ -1.92
PRPF38A-203ENST00000487160 A0A1W2PPV4 95 aa3.07□□□□□ -1.92
PRPF38A-203ENST00000487160 TSPAN11A1L157 253 aa3.07□□□□□ -1.92
PRPF38A-203ENST00000487160 H7C417 338 aa3.07□□□□□ -1.92
PRPF38A-203ENST00000487160 TNFSF15O95150 251 aa3.07□□□□□ -1.92
PRPF38A-203ENST00000487160 CTDNEP1O95476 244 aa3.07□□□□□ -1.92
PRPF38A-203ENST00000487160 TRBC1P01850 177 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms