RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ELF3P78545 371 aaPredicted RBP2.52□□□□□ -2.01
SMC4-218ENST00000486711 STX4Q12846 297 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 Q3ZCU0 254 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 KRTAP13-2Q52LG2 175 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 FBXO48Q5FWF7 155 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 PRR9Q5T870 116 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 FAM231DQ6ZW35 169 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 TRMT10CQ7L0Y3 403 aaKnown RBP2.52□□□□□ -2.01
SMC4-218ENST00000486711 ITPRIPQ8IWB1 547 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 ATPAF2Q8N5M1 289 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 SLC26A10Q8NG04 563 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 OR51Q1Q8NH59 317 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 C19orf60Q96EN9 201 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 ADTRPQ96IZ2 230 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 RAB1BQ9H0U4 201 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 ACOT13Q9NPJ3 140 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 C12orf4Q9NQ89 552 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 SDHAF3Q9NRP4 125 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 AGPAT3Q9NRZ7 376 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 CA10Q9NS85 328 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 RBM22Q9NW64 420 aaKnown RBP eCLIP2.52□□□□□ -2.012e-6■■■□□ 14.9
SMC4-218ENST00000486711 DDIT4Q9NX09 232 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 STX18Q9P2W9 335 aaKnown RBP2.52□□□□□ -2.01
SMC4-218ENST00000486711 ZNF229Q9UJW7 825 aa2.52□□□□□ -2.01
SMC4-218ENST00000486711 RBMX2Q9Y388 322 aaKnown RBP2.52□□□□□ -2.01
SMC4-218ENST00000486711 IGKV1D-17A0A075B6S4 117 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 IGKV1-6A0A0C4DH72 117 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 MGAT4DA6NG13 374 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 ZMPSTE24O75844 475 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 OR2A4O95047 310 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 IGKV1-39P01597 117 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 IGKV1-17P01599 117 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 IGLV7-43P04211 117 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 IGKV1D-39P04432 117 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 CDK1P06493 297 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 GIMD1P0DJR0 217 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 CELP19835 753 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 GDI2P50395 445 aaKnown RBP2.51□□□□□ -2.01
SMC4-218ENST00000486711 VSNL1P62760 191 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 ATP6AP1LQ52LC2 224 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 FAHD1Q6P587 224 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 SSX6Q7RTT6 188 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 LRRC8AQ8IWT6 810 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 OR4K2Q8NGD2 314 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 C22orf15Q8WYQ4 148 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 OR2A7Q96R45 310 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 ZNF649Q9BS31 505 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 SHCBP1LQ9BZQ2 653 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 DNAJC27Q9NZQ0 273 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 HMGXB4Q9UGU5 601 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 INSIG2Q9Y5U4 225 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
SMC4-218ENST00000486711 ELP1O95163 1332 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 OR6C70A6NIJ9 312 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 FAM25EA8MYX2 175 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 UPK2O00526 184 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 CNMDO75829 334 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 DHRS3O75911 302 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 RBX1P62877 108 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 LIN9Q5TKA1 542 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 KCTD16Q68DU8 428 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 APOBEC3HQ6NTF7 200 aaKnown RBP2.5□□□□□ -2.01
SMC4-218ENST00000486711 C16orf47Q6ZP98 133 aaPredicted RBP2.5□□□□□ -2.01
SMC4-218ENST00000486711 DAZ4Q86SG3 579 aaKnown RBP2.5□□□□□ -2.01
SMC4-218ENST00000486711 CYP4Z1Q86W10 505 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 SGPP2Q8IWX5 399 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 CYP4Z2PQ8N1L4 340 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 OR4D6Q8NGJ1 314 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 OR5H2Q8NGV7 314 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 OR8K3Q8NH51 312 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 FAM57AQ8TBR7 257 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 QKIQ96PU8 341 aaKnown RBP eCLIP2.5□□□□□ -2.01
SMC4-218ENST00000486711 DERL3Q96Q80 235 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 SPACA5Q96QH8 159 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 MS4A8Q9BY19 250 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 PRRG3Q9BZD7 231 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 PORCNQ9H237 461 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 LINC00574Q9H8X3 128 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 ABCB9Q9NP78 766 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 DAZ1Q9NQZ3 744 aaKnown RBP2.5□□□□□ -2.01
SMC4-218ENST00000486711 ZNF302Q9NR11 478 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 PARP11Q9NR21 331 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 SLC22A7Q9Y694 548 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 SCN1AP35498 2009 aa2.5□□□□□ -2.01
SMC4-218ENST00000486711 ZNF879B4DU55 563 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 RGS5O15539 181 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 CXorf1O96002 111 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 NRASP01111 189 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 HRASP01112 189 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 KRASP01116 189 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 IGHV1-46P01743 117 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 RLN2P04090 185 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 HLA-DMAP28067 261 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 TGM4P49221 684 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 FLI1Q01543 452 aaPredicted RBP2.49□□□□□ -2.01
SMC4-218ENST00000486711 C2orf80Q0P641 193 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 TMED1Q13445 227 aa2.49□□□□□ -2.01
SMC4-218ENST00000486711 ELOCQ15369 112 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms